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scnpilot_cont_500_p_scaffold_1565

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1565_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..66
DNA (66bp) protein (22aa)
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Pseudouridine synthase; EC=5.4.99.-;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Pseudouridine synthase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T9R3_MESCW
scnpilot_cont_500_p_scaffold_1565_2
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

229..1068
DNA (840bp) protein (280aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriace
pseudouridine synthase
scnpilot_cont_500_p_scaffold_1565_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1081..1494)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KN06_MESAW
Uncharacterized protein {ECO:0000313|EMBL:CDX55010.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
scnpilot_cont_500_p_scaffold_1565_4
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1714..2121
DNA (408bp) protein (136aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9D5_MESOW
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEH87582.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;
scnpilot_cont_500_p_scaffold_1565_5
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2137..2718)
DNA (582bp) protein (194aa)
UPI0003CF7748 related cluster n=1 Tax=unknown RepID=UPI0003CF7748 rbh
Phosphoglycerate mutase {ECO:0000313|EMBL:ESY71961.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
phosphoglycerate mutase
scnpilot_cont_500_p_scaffold_1565_6
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2801..3052)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003792B0B
yebN; membrane protein
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" sou
scnpilot_cont_500_p_scaffold_1565_7
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3822..4271
DNA (450bp) protein (150aa)
UPI0003CE9DC1 related cluster n=1 Tax=unknown RepID=UPI0003CE9DC1
UspA domain-containing protein {ECO:0000313|EMBL:CDX16533.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob
UspA domain-containing protein
scnpilot_cont_500_p_scaffold_1565_8
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4422..6887)
DNA (2466bp) protein (822aa)
Putative oxidoreductase protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAX3_9SPHN rbh
Putative oxidoreductase protein {ECO:0000313|EMBL:EGD58249.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
FAD dependent oxidoreductase
scnpilot_cont_500_p_scaffold_1565_9
Acetobacter orientalis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6936..7646)
DNA (711bp) protein (237aa)
transporter n=1 Tax=Gluconacetobacter europaeus RepID=UPI000237F11B
ABC transporter amino acid permease {ECO:0000313|EMBL:GAN66467.1}; TaxID=1231341 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acet
polar amino acid ABC transporter, inner membrane subunit
scnpilot_cont_500_p_scaffold_1565_10
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7665..8462)
DNA (798bp) protein (266aa)
Putative amino acid ABC transporter substrate-binding protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6APK4_PSERE
putative amino acid ABC transporter substrate-binding protein
Putative amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAN47618.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Ps
scnpilot_cont_500_p_scaffold_1565_11
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8704..9198
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E1CFB2
XRE family transcriptional regulator {ECO:0000313|EMBL:EWT03617.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryza
XRE family transcriptional regulator
scnpilot_cont_500_p_scaffold_1565_12
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9234..10268)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FCC9CF rbh
Agmatinase {ECO:0000313|EMBL:KIC20619.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.;"
putative agmatinase
scnpilot_cont_500_p_scaffold_1565_13
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10497..11279)
DNA (783bp) protein (261aa)
fabG3; short-chain dehydrogenase (EC:1.1.1.-)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035F4966 rbh
Cyclopentanol dehydrogenase {ECO:0000313|EMBL:KKB80680.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 171
scnpilot_cont_500_p_scaffold_1565_14
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11358..12206)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00035DB44B rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KJF65612.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
5-carboxymethyl-2-hydroxymuconate delta-isomerase
scnpilot_cont_500_p_scaffold_1565_15
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12254..13042)
DNA (789bp) protein (263aa)
N-acyl homoserine lactonase AttM {ECO:0000250|UniProtKB:Q8VPD5}; Short=AHL-lactonase AttM {ECO:0000250|UniProtKB:Q8VPD5};; EC=3.1.1.81;; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobact
N-acyl homoserine lactonase AttM n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=AHLLM_RHIL3 rbh
beta lactamase/homoserine lactonase
scnpilot_cont_500_p_scaffold_1565_16
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13072..13497)
DNA (426bp) protein (142aa)
cupin n=1 Tax=Aureimonas ureilytica RepID=UPI0003778907
Uncharacterized protein {ECO:0000313|EMBL:GAK69576.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1565_17
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13541..14536)
DNA (996bp) protein (332aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Frankia sp. CN3 RepID=G6HD48_9ACTO
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCV07541.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
putative ABC transporter permease protein
scnpilot_cont_500_p_scaffold_1565_18
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14542..16068)
DNA (1527bp) protein (509aa)
ABC transporter related n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EU37_9RHIZ
ABC transporter related {ECO:0000313|EMBL:CCV07540.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met
ABC transporter
scnpilot_cont_500_p_scaffold_1565_19
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16093..17355)
DNA (1263bp) protein (421aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ERQ1_9RHIZ
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCV07539.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;
putative ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_1565_20
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17642..18406
DNA (765bp) protein (255aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:KIG01746.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KIG01746.1};; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
short-chain dehydrogenase n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002E6E316
short-chain dehydrogenase/reductase
scnpilot_cont_500_p_scaffold_1565_21
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18668..19396
DNA (729bp) protein (243aa)
IclR helix-turn-helix domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XA07_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDX33085.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
IclR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1565_22
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19470..20942)
DNA (1473bp) protein (491aa)
UPI0003CF67E2 related cluster n=1 Tax=unknown RepID=UPI0003CF67E2 rbh
Putative rhizopine catabolism regulatory protein mocR {ECO:0000313|EMBL:CDX16548.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobiu
transcriptional regulator with HTH domain and aminotransferase domain rbh
Displaying 22 items

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