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scnpilot_cont_500_p_scaffold_5338

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_5338_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..155)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ES48_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84000.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
scnpilot_cont_500_p_scaffold_5338_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(158..2539)
DNA (2382bp) protein (794aa)
regulatory protein n=1 Tax=Rhizobium loti RepID=UPI00037E3148
Sigma factor SigB regulation protein rsbU {ECO:0000313|EMBL:AID28115.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
hypothetical protein
scnpilot_cont_500_p_scaffold_5338_3
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2536..3711)
DNA (1176bp) protein (392aa)
ubiE2; ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Methyltransferase domain family n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QTZ7_9RHOB rbh
Methyltransferase domain family {ECO:0000313|EMBL:EEE44712.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia al
scnpilot_cont_500_p_scaffold_5338_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3711..4226)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ65_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84003.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_5338_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4417..5364
DNA (948bp) protein (316aa)
Stage II sporulation protein E n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUK9_9RHIZ rbh
Stage II sporulation protein E {ECO:0000313|EMBL:EYR84004.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
serine phosphatase
scnpilot_cont_500_p_scaffold_5338_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5493..5915)
DNA (423bp) protein (141aa)
Transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U906_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:ENN86723.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sou
putative transcriptional regulator protein, GntR family
scnpilot_cont_500_p_scaffold_5338_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6138..6311
DNA (174bp) protein (58aa)
EutD n=2 Tax=Rhizobium meliloti RepID=F7XBZ0_SINMM
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KFC64857.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
EutD
scnpilot_cont_500_p_scaffold_5338_8
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6337..7203)
DNA (867bp) protein (289aa)
Oligopeptide/dipeptide ABC transporter ATPase id=2511061 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
oligopeptide/dipeptide ABC transporter, ATPase subunit; K02032 peptide/nickel transport system ATP-binding protein Tax=GWF1_Rhodobacteraceae_65_7_curated
putative peptide ABC transporter ATP-binding protein y4tS
Displaying 8 items

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