ggKbase home page

scnpilot_cont_500_p_scaffold_2313

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2313_1
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..925
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F6C8F4
Putative Outer membrane autotransporter barrel {ECO:0000313|EMBL:CDX32248.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" so
hypothetical protein
scnpilot_cont_500_p_scaffold_2313_2
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1088..2497)
DNA (1410bp) protein (470aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; M
UPI0003CEA4EA related cluster n=1 Tax=unknown RepID=UPI0003CEA4EA rbh
integral membrane sensor signal transduction histidine kinase rbh
scnpilot_cont_500_p_scaffold_2313_3
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2494..3210)
DNA (717bp) protein (239aa)
UPI0003CF459B related cluster n=1 Tax=unknown RepID=UPI0003CF459B rbh
Transcriptional regulator {ECO:0000313|EMBL:ESY88719.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain rbh
scnpilot_cont_500_p_scaffold_2313_4
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3548..3844
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EXH6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV08857.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met
hypothetical protein
scnpilot_cont_500_p_scaffold_2313_5
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3880..4161
DNA (282bp) protein (94aa)
UPI0003CE8DD6 related cluster n=1 Tax=unknown RepID=UPI0003CE8DD6
Uncharacterized protein {ECO:0000313|EMBL:ESY96130.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_2313_6
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4400..4720
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGY7_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB44602.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
scnpilot_cont_500_p_scaffold_2313_7
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4974..5279
DNA (306bp) protein (102aa)
ATP-dependent Clp protease adaptor n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAU1_9RHIZ
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.
clpS; ATP-dependent Clp protease adaptor
scnpilot_cont_500_p_scaffold_2313_8
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5310..7397)
DNA (2088bp) protein (696aa)
UPI0003CEB1AA related cluster n=1 Tax=unknown RepID=UPI0003CEB1AA rbh
Membrane protein {ECO:0000313|EMBL:ESY77229.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC22
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_2313_9
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7399..10224)
DNA (2826bp) protein (942aa)
N-terminal double-transmembrane domain-containing protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJ95_MESAW rbh
N-terminal double-transmembrane domain-containing protein {ECO:0000313|EMBL:AGB44605.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizo
N-terminal double-transmembrane domain-containing protein
scnpilot_cont_500_p_scaffold_2313_10
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10221..11219)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5FAD2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV08851.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met
hypothetical protein
scnpilot_cont_500_p_scaffold_2313_11
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11219..12223)
DNA (1005bp) protein (335aa)
ATPase AAA n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FL53_9RHIZ rbh
MoxR-like ATPase rbh
ATPase AAA {ECO:0000313|EMBL:ESX78675.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;
scnpilot_cont_500_p_scaffold_2313_12
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12382..13011
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036700C9 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AID32104.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huak
scnpilot_cont_500_p_scaffold_2313_13
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13025..13648
DNA (624bp) protein (208aa)
NUDIX hydrolase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAT5_9RHIZ rbh
NUDIX hydrolase rbh
NUDIX hydrolase {ECO:0000313|EMBL:EHH11259.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CC
scnpilot_cont_500_p_scaffold_2313_14
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13645..14874
DNA (1230bp) protein (410aa)
UPI0003CFB711 related cluster n=1 Tax=unknown RepID=UPI0003CFB711 rbh
Poly(A) polymerase {ECO:0000313|EMBL:ESZ28975.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C0
polynucleotide adenylyltransferase
scnpilot_cont_500_p_scaffold_2313_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14914..15891)
DNA (978bp) protein (326aa)
Mlr2725 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HT0_RHILO rbh
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:CDX15981.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" s
hypothetical protein
scnpilot_cont_500_p_scaffold_2313_16
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15973..16551)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000365D355 rbh
hypothetical protein rbh
Mlr2724 protein {ECO:0000313|EMBL:BAB49785.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAF
scnpilot_cont_500_p_scaffold_2313_17
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16804..16989)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E8FBF8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV11285.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium cice
scnpilot_cont_500_p_scaffold_2313_18
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17166..18080)
DNA (915bp) protein (305aa)
Coproporphyrinogen oxidase {ECO:0000256|SAAS:SAAS00122066}; EC=1.3.3.3 {ECO:0000256|SAAS:SAAS00122066};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacter
coproporphyrinogen oxidase (EC:1.3.3.3)
UPI0003D048D8 related cluster n=1 Tax=unknown RepID=UPI0003D048D8 rbh
scnpilot_cont_500_p_scaffold_2313_19
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18358..18615
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EXF5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX15972.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_2313_20
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18730..19077)
DNA (348bp) protein (116aa)
UPI0003CF4EE2 related cluster n=1 Tax=unknown RepID=UPI0003CF4EE2
Uncharacterized protein {ECO:0000313|EMBL:CDX27256.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
scnpilot_cont_500_p_scaffold_2313_21
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19182..19625)
DNA (444bp) protein (148aa)
DNA-binding transcriptional dual regulator,Fe-S center for redox-sensing n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIF1_9RHIZ
DNA-binding transcriptional dual regulator,Fe-S center for redox-sensing {ECO:0000313|EMBL:CCV15863.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteri
redox-sensitive transcriptional activator SoxR
scnpilot_cont_500_p_scaffold_2313_22
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19838..20296)
DNA (459bp) protein (153aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-R
UPI0003CDEB46 related cluster n=1 Tax=unknown RepID=UPI0003CDEB46
tRNA/rRNA methyltransferase SpoU
scnpilot_cont_500_p_scaffold_2313_23
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20580..21074
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KH01_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB44617.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium aust
scnpilot_cont_500_p_scaffold_2313_24
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21111..23003
DNA (1893bp) protein (631aa)
ABC transporter related protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YDE5_MESOW rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEH86741.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob
scnpilot_cont_500_p_scaffold_2313_25
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23000..24886
DNA (1887bp) protein (629aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI000368BA86 rbh
ABC transporter family protein {ECO:0000313|EMBL:AID32089.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
ABC transporter rbh
scnpilot_cont_500_p_scaffold_2313_26
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24899..25360
DNA (462bp) protein (154aa)
Acetyltransferase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7EZH3_9RHIZ
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ESZ04681.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp
N-acetyltransferase GCN5
scnpilot_cont_500_p_scaffold_2313_27
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25362..25676
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHY5_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB44621.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium aust
scnpilot_cont_500_p_scaffold_2313_28
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25745..26089)
DNA (345bp) protein (115aa)
UPI0003CE9DF6 related cluster n=1 Tax=unknown RepID=UPI0003CE9DF6
Cupin {ECO:0000313|EMBL:ESY64206.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
Cupin 2 barrel domain-containing protein
scnpilot_cont_500_p_scaffold_2313_29
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26400..26960
DNA (561bp) protein (187aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HU4_RHILO rbh
ubiquinol-cytochrome C reductase iron-sulfur subunit
scnpilot_cont_500_p_scaffold_2313_30
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26978..27346
DNA (369bp) protein (123aa)
PREDICTED: cytochrome b-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C106AA
cytochrome b/b6 domain
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A0
Displaying 30 items

View Taxonomy