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scnpilot_cont_500_p_scaffold_226

Search features with annotation key words

Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_226_1
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..656
DNA (654bp) protein (218aa)
extracellular solute-binding protein, partial n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627BA4
Oligopeptide ABC transporter, periplasmic oligopep tide-binding protein OppA {ECO:0000313|EMBL:CDP52528.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicr
ABC-type dipeptide transport system, periplasmic component
scnpilot_cont_500_p_scaffold_226_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

754..1947
DNA (1194bp) protein (398aa)
Putative periplasmic protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IY79_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL28848.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
glycosyl hydrolase
scnpilot_cont_500_p_scaffold_226_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1982..2977
DNA (996bp) protein (332aa)
ABC transporter permease n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627AFA rbh
Oligopeptide transport system permease protein Opp B {ECO:0000313|EMBL:CDP52526.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" sou
binding-protein-dependent transport system inner membrane protein
scnpilot_cont_500_p_scaffold_226_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2988..4109
DNA (1122bp) protein (374aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E3A4_DICTD
Oligopeptide transport system permease protein Opp C {ECO:0000313|EMBL:CDP52525.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" sou
binding-protein-dependent transport system inner membrane protein
scnpilot_cont_500_p_scaffold_226_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4114..5199
DNA (1086bp) protein (362aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D4C3_PAESJ rbh
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CDP52524.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="
oligopeptide/dipeptide ABC transporter ATPase
scnpilot_cont_500_p_scaffold_226_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5189..6226
DNA (1038bp) protein (346aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLV2_ROSCS rbh
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:CDP52523.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="
oligopeptide/dipeptide ABC transporter ATPase
scnpilot_cont_500_p_scaffold_226_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6223..7032
DNA (810bp) protein (270aa)
Putative IclR family transcriptional regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8E4_CALAS
Transcriptional regulator, IclR family {ECO:0000313|EMBL:CDP52522.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
putative IclR family transcriptional regulator
scnpilot_cont_500_p_scaffold_226_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7045..7923
DNA (879bp) protein (293aa)
Putative dihydrodipicolinate synthase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CC54_9RHOB
Dihydrodipicolinate synthase family {ECO:0000313|EMBL:CDP52521.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp.
Dihydrodipicolinate synthase
scnpilot_cont_500_p_scaffold_226_9
unknown

Not on your lists

8895..9194
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_226_10
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9169..10002)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035FC94E rbh
ABC transporter permease {ECO:0000313|EMBL:KGD96854.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sou
mtlG; Polyol ABC transporter, permease protein MtlG
scnpilot_cont_500_p_scaffold_226_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9995..10846)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036DB87F
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:KFC71687.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="B
Sugar-transport integral membrane protein ABC transporter
scnpilot_cont_500_p_scaffold_226_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10936..12213)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000365CC2D
Putative ABC transporter (Substrate binding protein) {ECO:0000313|EMBL:KFC71684.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" sourc
Putative ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_226_13
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12668..13615)
DNA (948bp) protein (316aa)
oxidoreductase n=1 Tax=Salinispora pacifica RepID=UPI00035E427B
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63527.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
oxidoreductase domain-containing protein
scnpilot_cont_500_p_scaffold_226_14
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13736..14926)
DNA (1191bp) protein (397aa)
Mandelate racemase/muconate lactonizing enzyme family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLQ6_9PROT rbh
Mandelate racemase {ECO:0000313|EMBL:KKC41444.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;
mandelate racemase/muconate lactonizing protein
scnpilot_cont_500_p_scaffold_226_15
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14954..15970)
DNA (1017bp) protein (339aa)
Putative oxidoreductase protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AJ86_RHIET
Putative oxidoreductase protein {ECO:0000313|EMBL:EGE55403.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
putative oxidoreductase
scnpilot_cont_500_p_scaffold_226_16
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16014..17087)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037FDB72 rbh
Oxidoreductase {ECO:0000313|EMBL:ETK32869.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
oxidoreductase domain-containing protein
scnpilot_cont_500_p_scaffold_226_17
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17494..18342
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AUH4_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCD01583.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum b
scnpilot_cont_500_p_scaffold_226_18
unknown

Not on your lists

18577..19803
DNA (1227bp) protein (409aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_226_19
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19923..20531)
DNA (609bp) protein (203aa)
Dak phosphatase {ECO:0000313|EMBL:KDR41272.1}; Putative dihydroxyacetone kinase , ADP-binding subunit {ECO:0000313|EMBL:CDY78512.1}; EC=2.7.1.29 {ECO:0000313|EMBL:CDY78512.1};; TaxID=60547 species="Ba
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-M08 RepID=UPI00037646E8
Dak phosphatase
scnpilot_cont_500_p_scaffold_226_20
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20531..21532)
DNA (1002bp) protein (334aa)
dahK; PTS-dependent dihydroxyacetone kinase (EC:2.7.-.-)
PTS-dependent dihydroxyacetone kinase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C409_9RHIZ rbh
PTS-dependent dihydroxyacetone kinase {ECO:0000313|EMBL:EIM76561.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="N
scnpilot_cont_500_p_scaffold_226_21
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21647..22567)
DNA (921bp) protein (307aa)
Dihydrodipicolinate synthetase n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4Q7Y8_CALH1
Dihydrodipicolinate synthase {ECO:0000313|EMBL:KKB09877.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis
dihydrodipicolinate synthetase
scnpilot_cont_500_p_scaffold_226_22
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22933..23913
DNA (981bp) protein (327aa)
mRNA-binding protein (EC:1.3.1.45)
Putative mRNA-binding protein {ECO:0000313|EMBL:ACE91787.1}; EC=1.3.1.45 {ECO:0000313|EMBL:ACE91787.1};; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
Putative mRNA-binding protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PT42_RHIE6
scnpilot_cont_500_p_scaffold_226_23
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(23969..24496)
DNA (528bp) protein (176aa)
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5DVQ9_9GAMM
Uncharacterized protein Tax=RBG_13_Nitrospirae_43_8_curated
scnpilot_cont_500_p_scaffold_226_24
unknown

Not on your lists

comp(24457..24795)
DNA (339bp) protein (113aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_226_25
unknown

Not on your lists

comp(24913..25122)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_226_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25153..25509)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036E5853
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEL29658.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluoresce
scnpilot_cont_500_p_scaffold_226_27
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25741..26058)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B54CBA
TIR protein
TIR protein {ECO:0000313|EMBL:AJE49275.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
scnpilot_cont_500_p_scaffold_226_28
unknown

Not on your lists

26182..26703
DNA (522bp) protein (174aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_226_29
unknown

Not on your lists

27105..27386
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_226_30
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28505..30337)
DNA (1833bp) protein (611aa)
HAF family extracellular repeat-containing protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WYM4_9BURK
HAF family extracellular repeat-containing protein {ECO:0000313|EMBL:EON12356.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" s
hypothetical protein
Displaying items 1-30 of 57 in total

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