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scnpilot_cont_500_p_scaffold_171

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Displaying items 1-30 of 67 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_171_1

Not on your lists

comp(1..162)
DNA (162bp) protein (54aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase F1 subcomplex beta subunit id=4908612 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
F0F1 ATP synthase subunit beta
scnpilot_cont_500_p_scaffold_171_2
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178..1071)
DNA (894bp) protein (298aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
ATP synthase gamma chain id=4908613 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
atpG; ATP synthase, F1 sector, gamma subunit
scnpilot_cont_500_p_scaffold_171_3

Not on your lists

comp(1071..2600)
DNA (1530bp) protein (510aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase subunit alpha n=1 Tax=uncultured bacterium RepID=K2EW86_9BACT rbh
atpA; ATP synthase, F1 sector, alpha subunit
scnpilot_cont_500_p_scaffold_171_4
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2604..3158)
DNA (555bp) protein (185aa)
ATP synthase F1 subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
ATP synthase subunit delta id=4908615 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodomicrobium vannielii genus=Rhodomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
ATP synthase subunit delta
scnpilot_cont_500_p_scaffold_171_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

3789..4082
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024W4_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83462.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
scnpilot_cont_500_p_scaffold_171_6
Angomonas deanei, Angomonas, Kinetoplastida, Eukaryota

Not on your lists

4260..6896
DNA (2637bp) protein (879aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AED5 rbh
Leucine-richprotein (LRRP) {ECO:0000313|EMBL:EPY16909.1}; TaxID=59799 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Strigomonadinae; Angomonas.;" source="Angomonas deanei.;"
scnpilot_cont_500_p_scaffold_171_7
Crocosphaera watsonii, Crocosphaera, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6948..8294)
DNA (1347bp) protein (449aa)
TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup n=3 Tax=Crocosphaera watsonii RepID=G5J9J9_CROWT rbh
TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup {ECO:0000313|EMBL:CCQ65587.1}; TaxID=1284629 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Crocosphaera.;" sourc
hypothetical protein
scnpilot_cont_500_p_scaffold_171_8
Crocosphaera watsonii, Crocosphaera, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8291..9721)
DNA (1431bp) protein (477aa)
TldD family protein, Beta/Gamma-proteobacterial subgroup n=5 Tax=Crocosphaera watsonii RepID=G5J7M8_CROWT rbh
Peptidase U62, modulator of DNA gyrase {ECO:0000313|EMBL:EAM49959.1}; TaxID=165597 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Crocosphaera.;" source="Crocosphaera watsonii
hypothetical protein
scnpilot_cont_500_p_scaffold_171_9
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9706..10230)
DNA (525bp) protein (175aa)
p-hydroxyphenylacetate 3-hydroxylase, reductase component (EC:1.5.1.36)
p-hydroxyphenylacetate 3-hydroxylase, reductase component {ECO:0000313|EMBL:AIL65570.1}; EC=1.5.1.36 {ECO:0000313|EMBL:AIL65570.1};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteri
Actinorhodin polyketide dimerase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7M3_HYPSM
scnpilot_cont_500_p_scaffold_171_10
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(10502..10714)
DNA (213bp) protein (71aa)
General stress response protein n=1 Tax=Legionella pneumophila subsp. pneumophila RepID=I7HLV6_LEGPN
CsbD; General stress response protein
hypothetical protein Tax=RBG_16_Chloroflexi_51_16_curated
scnpilot_cont_500_p_scaffold_171_11
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11114..11434
DNA (321bp) protein (107aa)
Divalent ion tolerance protein CutA1 n=1 Tax=uncultured bacterium RepID=K2EUC5_9BACT
cutA1; divalent ion tolerance protein CutA1; K03926 periplasmic divalent cation tolerance protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
putative divalent ion tolerance protein CutA1
scnpilot_cont_500_p_scaffold_171_12

Not on your lists


11533..11997
DNA (465bp) protein (155aa)
50S ribosomal protein L13 n=1 Tax=uncultured bacterium RepID=K2FF55_9BACT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rplM; 50S ribosomal subunit protein L13
scnpilot_cont_500_p_scaffold_171_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12000..12494
DNA (495bp) protein (165aa)
30S ribosomal protein S9 n=1 Tax=uncultured bacterium RepID=K2DTU3_9BACT
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
30S ribosomal protein S9
scnpilot_cont_500_p_scaffold_171_14
unknown

Not on your lists

12448..12753
DNA (306bp) protein (102aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_171_15
unknown

Not on your lists

12840..12986
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_171_16
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13000..13500)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EUH2_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL28972.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella dra
conserved protein of unknown function [cupin domain]
scnpilot_cont_500_p_scaffold_171_17
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13683..13991
DNA (309bp) protein (103aa)
cytochrome C biogenesis protein CcdA n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI00031DCE26
Putative divalent cation tolerance protein {ECO:0000313|EMBL:EKF00870.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
CutA1 divalent ion tolerance protein
scnpilot_cont_500_p_scaffold_171_18
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14100..15518
DNA (1419bp) protein (473aa)
protease Do; K01362 [EC:3.4.21.-] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
degP; periplasmic serine protease, Do (EC:3.4.21.-)
Protease Do id=4908879 bin=GWC2_Alphaproteobacteria_42_16 species=Hirschia baltica genus=Hirschia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
scnpilot_cont_500_p_scaffold_171_19
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15518..16792
DNA (1275bp) protein (425aa)
Putative uncharacterized protein id=4908877 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Amoebophilus asiaticus genus=Candidatus Amoebophilus taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
hypothetical protein; K07478 putative ATPase Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_171_20
unknown

Not on your lists

17124..17702
DNA (579bp) protein (193aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_171_21
unknown

Not on your lists

17750..19294
DNA (1545bp) protein (515aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_171_22
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19380..21098)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SQR1_RHOPH
Uncharacterized protein {ECO:0000313|EMBL:KJE36575.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira
hypothetical protein
scnpilot_cont_500_p_scaffold_171_23
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21210..22424)
DNA (1215bp) protein (405aa)
Permease of the major facilitator superfamily id=4908874 bin=GWC2_Alphaproteobacteria_42_16 species=Magnetospirillum magneticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
major facilitator superfamily permease Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_171_24

Not on your lists

22633..23490
DNA (858bp) protein (286aa)
Putative uncharacterized protein id=4908872 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE09336.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_171_25
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23500..24063
DNA (564bp) protein (188aa)
peptidase A24A prepilin type IV; K02278 prepilin peptidase CpaA [EC:3.4.23.43] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
Peptidase A24A prepilin type IV id=4908870 bin=GWC2_Alphaproteobacteria_42_16 species=Sinorhizobium medicae genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
scnpilot_cont_500_p_scaffold_171_26
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24077..24877
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EUI0_9BACT
Flp pilus assembly CpaB; K02279 pilus assembly protein CpaB Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
cpaB; pilus assembly protein CpaB
scnpilot_cont_500_p_scaffold_171_27

Not on your lists

24879..26381
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EGS7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE09333.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_171_28
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26423..27157
DNA (735bp) protein (245aa)
Uncharacterized protein id=4908866 bin=GWC2_Alphaproteobacteria_42_16 species=Vibrio splendidus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
putative Pilus assembly protein CpaD Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_171_29
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27161..28363
DNA (1203bp) protein (401aa)
Two-component response regulator id=4908865 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
two-component response regulator; K02282 pilus assembly protein CpaE Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
two-component response regulator
scnpilot_cont_500_p_scaffold_171_30
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28419..29828
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FF92_9BACT rbh
cpaF; pilus assembly protein; K02283 pilus assembly protein CpaF Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
pilus assembly protein CpaF cpaF
Displaying items 1-30 of 67 in total

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