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scnpilot_cont_500_p_scaffold_271

Search features with annotation key words

Displaying items 1-30 of 63 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_271_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40..690
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82V38_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ47774.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
scnpilot_cont_500_p_scaffold_271_2
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(725..1627)
DNA (903bp) protein (301aa)
DNA primase n=1 Tax=Enterobacter hormaechei RepID=UPI00031C3923
DNA primase
Uncharacterized protein {ECO:0000313|EMBL:ESL67976.1}; TaxID=1328397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pne
scnpilot_cont_500_p_scaffold_271_3
unknown

Not on your lists

comp(2033..2410)
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_271_4

Not on your lists

2612..2899
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QQG2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI09483.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_271_5
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2899..3189
DNA (291bp) protein (97aa)
Plasmid stabilization system n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFZ8_GALCS
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:ADL55445.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella caps
scnpilot_cont_500_p_scaffold_271_6

Not on your lists

comp(3342..3887)
DNA (546bp) protein (182aa)
TraF maturation peptidase n=1 Tax=uncultured bacterium RepID=Q1H9X2_9BACT
TraF maturation peptidase {ECO:0000313|EMBL:CAJ43353.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
traF; Conjugative transfer signal peptidase TraF
scnpilot_cont_500_p_scaffold_271_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3945..5771)
DNA (1827bp) protein (609aa)
IncP-type DNA transfer coupling protein TraG n=1 Tax=Nitrosospira sp. APG3 RepID=M5DW64_9PROT rbh
IncP-type DNA transfer coupling protein TraG {ECO:0000313|EMBL:CCU63565.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" so
conjugal transfer coupling protein TraG
scnpilot_cont_500_p_scaffold_271_8
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5768..7684)
DNA (1917bp) protein (639aa)
Putative plasmid conjugal transfer protein n=1 Tax=Burkholderia pseudomallei (strain K96243) RepID=Q63PV8_BURPS
Conjugal transfer relaxase TraI {ECO:0000313|EMBL:EXI79996.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. B
conjugal transfer relaxase TraI
scnpilot_cont_500_p_scaffold_271_9
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7681..8040)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVV9_ACCPU
conjugal transfer relaxosome component TraJ
Uncharacterized protein {ECO:0000313|EMBL:ACV37769.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
scnpilot_cont_500_p_scaffold_271_10
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8317..8673
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVV8_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV37768.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
scnpilot_cont_500_p_scaffold_271_11
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8673..9401
DNA (729bp) protein (243aa)
conjugal transfer protein TraL n=1 Tax=Methylomicrobium buryatense RepID=UPI00034B3ECD
Conjugal transfer protein TraL {ECO:0000313|EMBL:KGR62628.1}; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
conjugal transfer protein TraL
scnpilot_cont_500_p_scaffold_271_12
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9398..9829
DNA (432bp) protein (144aa)
conjugal transfer protein TraM n=1 Tax=Methylomicrobium buryatense RepID=UPI000345963A
Protein traM {ECO:0000313|EMBL:CCE25811.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcali
conjugal transfer protein TraM
scnpilot_cont_500_p_scaffold_271_13
Marinobacter adhaerens, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9834..10193)
DNA (360bp) protein (120aa)
Conjugal transfer protein TraO n=2 Tax=Gammaproteobacteria RepID=E4PRS6_MARAH
conjugal transfer protein TraO
Conjugal transfer protein TraO {ECO:0000313|EMBL:ADP99960.1}; TaxID=225937 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobact
scnpilot_cont_500_p_scaffold_271_14

Not on your lists

comp(10227..11240)
DNA (1014bp) protein (338aa)
Transcriptional repressor protein KorB n=4 Tax=root RepID=KORB2_ECOLX rbh
KorB partitioning and repressor protein {ECO:0000313|EMBL:ADU90767.1}; ParB equivalent nuclease {ECO:0000313|EMBL:CAG30912.1}; Transcriptional repressor protein korB {ECO:0000313|EMBL:ADU90934.1}; Tra
ParB family protein
scnpilot_cont_500_p_scaffold_271_15
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11237..12019)
DNA (783bp) protein (261aa)
Protein IncC n=10 Tax=root RepID=INCC2_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:KGR62623.1}; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicol
chromosome (plasmid) partitioning protein ParA
scnpilot_cont_500_p_scaffold_271_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12552..12830)
DNA (279bp) protein (93aa)
Single-stranded DNA-binding protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6V2_NITMU
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=323848 species="Bacteria; Proteobacteria; Beta
scnpilot_cont_500_p_scaffold_271_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14311..15201)
DNA (891bp) protein (297aa)
TrfA family protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZAN2_9RHOO rbh
TrfA family protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_cont_500_p_scaffold_271_18
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15479..15889
DNA (411bp) protein (137aa)
Conjugal transfer protein TrbA n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TAV0_9GAMM
Conjugal transfer protein TrbA
Conjugal transfer protein TrbA {ECO:0000313|EMBL:AGS40881.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloc
scnpilot_cont_500_p_scaffold_271_19
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16070..17035
DNA (966bp) protein (322aa)
Mating pair formation protein n=1 Tax=uncultured bacterium RepID=U3KYL9_9BACT
Conjugal transfer protein TrbB {ECO:0000313|EMBL:KFL46886.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
conjugal transfer ATPase TrbB
scnpilot_cont_500_p_scaffold_271_20
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17038..17463
DNA (426bp) protein (142aa)
Conjugal transfer protein TrbC n=2 Tax=Bacteria RepID=A1WDP7_ACISJ
conjugal transfer protein TrbC
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KGK67412.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
scnpilot_cont_500_p_scaffold_271_21
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17438..17761
DNA (324bp) protein (108aa)
Conjugation protein protein TrbD n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NWM4_AROAE
trbD; conjugal transfer protein TrbD
Conjugation protein protein TrbD {ECO:0000313|EMBL:CAI10540.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aro
scnpilot_cont_500_p_scaffold_271_22
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17758..20352
DNA (2595bp) protein (865aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW41_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:ACV37851.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosph
conjugal transfer protein TrbE
scnpilot_cont_500_p_scaffold_271_23

Not on your lists

20349..21146
DNA (798bp) protein (266aa)
TrbF mating pair formation protein n=2 Tax=Bacteria RepID=D4N5H4_9BACT rbh
TrbF mating pair formation protein {ECO:0000313|EMBL:ADD63278.1}; TaxID=743682 species="Bacteria; environmental samples.;" source="uncultured bacterium pAKD4.;"
conjugal transfer protein TrbF
scnpilot_cont_500_p_scaffold_271_24
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21155..22285
DNA (1131bp) protein (377aa)
TrbG mating pair formation protein n=1 Tax=Burkholderia cepacia RepID=K4IYR8_BURCE
TrbG mating pair formation protein {ECO:0000313|EMBL:AFU76001.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia
trbG; conjugal transfer protein TrbG
scnpilot_cont_500_p_scaffold_271_25
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22282..22836
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW39_ACCPU
Conjugal transfer protein TrbH {ECO:0000313|EMBL:EXI84245.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA
conjugal transfer protein TrbH
scnpilot_cont_500_p_scaffold_271_26
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22847..24166
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI000380E43D
Type IV secretion system protein virB10 {ECO:0000313|EMBL:EXI84244.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibact
trbI; conjugal transfer protein TrbI
scnpilot_cont_500_p_scaffold_271_27
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24159..24935
DNA (777bp) protein (259aa)
TrbJ n=1 Tax=Bordetella pertussis RepID=Q08KZ3_BORPT
TrbJ {ECO:0000313|EMBL:BAF33465.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
conjugal transfer protein TrbJ
scnpilot_cont_500_p_scaffold_271_28
unknown

Not on your lists

24945..25151
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_271_29

Not on your lists

25156..26481
DNA (1326bp) protein (442aa)
Mating pair formation protein n=1 Tax=uncultured bacterium RepID=J9R8T0_9BACT
Mating pair formation protein {ECO:0000313|EMBL:AFR44387.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TrbL/VirB6 plasmid conjugal transfer protein
scnpilot_cont_500_p_scaffold_271_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26495..26950
DNA (456bp) protein (152aa)
Mating pair formation protein, muramidase/lysozyme n=1 Tax=uncultured bacterium RepID=J9RY26_9BACT
transglycosylase SLT domain-containing protein 6
TrbN {ECO:0000313|EMBL:AEX00473.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans)
Displaying items 1-30 of 63 in total

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