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scnpilot_cont_500_p_scaffold_1236

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1236_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

75..713
DNA (639bp) protein (213aa)
Putative uncharacterized protein id=4659184 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_1236_2
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

838..1062
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UBZ8_9CHRO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY91956.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
scnpilot_cont_500_p_scaffold_1236_3
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1079..1765
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDD9_DESAR
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_1236_4
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1762..3396)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=2 Tax=Paenibacillus mucilaginosus RepID=F8FDJ3_PAEMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC27965.1}; TaxID=1116391 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus 3016.;"
scnpilot_cont_500_p_scaffold_1236_5
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(3399..4616)
DNA (1218bp) protein (406aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000255|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000255|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000255|HA
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=RLMN_HERA2 rbh
ribosomal RNA large subunit methyltransferase N rbh
scnpilot_cont_500_p_scaffold_1236_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4812..6854)
DNA (2043bp) protein (681aa)
SH3 type 3 domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZQ3_PSEUX
SH3 type 3 domain-containing protein
SH3 type 3 domain protein {ECO:0000313|EMBL:AEA27729.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocar
scnpilot_cont_500_p_scaffold_1236_7
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

7488..8786
DNA (1299bp) protein (433aa)
WD40 domain protein beta Propeller n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4L6_THERP
WD40 domain-containing protein beta Propeller
WD40 domain protein beta Propeller {ECO:0000313|EMBL:ACM06624.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum
scnpilot_cont_500_p_scaffold_1236_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8900..9571
DNA (672bp) protein (224aa)
udk; uridine kinase (EC:2.7.1.48); K00876 uridine kinase [EC:2.7.1.48] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Uridine kinase id=1699650 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
udk; uridine kinase
scnpilot_cont_500_p_scaffold_1236_9
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(9574..10251)
DNA (678bp) protein (226aa)
peptidase S51 dipeptidase E; K13282 cyanophycinase [EC:3.4.15.6] Tax=RBG_16_Chloroflexi_51_16_curated
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4JHC1_9DELT
peptidase S51 dipeptidase E
scnpilot_cont_500_p_scaffold_1236_10
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10468..10959
DNA (492bp) protein (164aa)
Histidine kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE59_CHIPD
response regulator receiver modulated diguanylate cyclase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
histidine kinase
scnpilot_cont_500_p_scaffold_1236_11
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(11008..11310)
DNA (303bp) protein (101aa)
RNA-binding proteins (RRM domain) Tax=RBG_16_RIF_OP11_02_41_13_curated
RNA-binding region RNP-1 id=4715559 bin=GWA2__Bacteriovorax-rel_49_15 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
RNA-binding proteins (RRM domain)
scnpilot_cont_500_p_scaffold_1236_12
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11718..12116)
DNA (399bp) protein (133aa)
Signal transduction histidine kinase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W5V4_MAGSA
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:BAE50771.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source
scnpilot_cont_500_p_scaffold_1236_13
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12315..13559)
DNA (1245bp) protein (415aa)
Putative SAM-dependent methyltransferase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HUZ1_CYAP4 rbh
SAM-dependent methyltransferase rbh
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:ACL43038.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strai
scnpilot_cont_500_p_scaffold_1236_14
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13563..14339)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SGA8_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB76976.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (s
scnpilot_cont_500_p_scaffold_1236_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

14790..15776
DNA (987bp) protein (329aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TPJ5_9CHLR rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFH85609.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales;
glpB; putative glycerol-3-phosphate ABC transporter permease
scnpilot_cont_500_p_scaffold_1236_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

15773..16642
DNA (870bp) protein (290aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TPJ6_9CHLR rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFH85610.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales;
glycerol-3-phosphate ABC transporter permease
scnpilot_cont_500_p_scaffold_1236_17
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

16826..18415
DNA (1590bp) protein (530aa)
Extracellular solute-binding protein family 1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TPJ7_9CHLR
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EFH85611.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Kte
carbohydrate ABC transporter substrate-binding protein, CUT1 family
scnpilot_cont_500_p_scaffold_1236_18
RIFOXYB1_FULL_OP11_Amesbacteria_44_23_curated, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(18503..19126)
DNA (624bp) protein (208aa)
YruB family glutaredoxin-like protein Tax=RIFOXYB1_FULL_OP11_Amesbacteria_44_23_curated
glutaredoxin
glutaredoxin id=725576 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
scnpilot_cont_500_p_scaffold_1236_19
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(19236..19472)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXG5_THERP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM05605.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATC
scnpilot_cont_500_p_scaffold_1236_20
Microgenomates bacterium GW2011_GWA1_46_7, Microgenomates, Bacteria

Not on your lists

19749..20339
DNA (591bp) protein (197aa)
Probable non-canonical purine NTP phosphatase n=1 Tax=uncultured planctomycete 6FN RepID=A9LGZ7_9BACT
Putative non-canonical purine NTP phosphatase {ECO:0000313|EMBL:KKU43526.1}; TaxID=1618495 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_46_7.;"
NTPase
scnpilot_cont_500_p_scaffold_1236_21
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

20388..20645
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBV4_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ42269.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
scnpilot_cont_500_p_scaffold_1236_22
unknown

Not on your lists

20687..20959
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1236_23
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

20987..21298
DNA (312bp) protein (104aa)
Recombination protein MgsA n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLB8_THEM7
recombination factor protein RarA
Recombination factor protein RarA {ECO:0000313|EMBL:AIE88110.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimo
Displaying 23 items

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