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scnpilot_cont_500_p_scaffold_1474

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1474_1
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1688)
DNA (1686bp) protein (562aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilu
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4Q6_GEOOG
integral membrane sensor signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_1474_2
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(1700..2410)
DNA (711bp) protein (237aa)
OmpR family two-component response regulator Tax=RBG_16_Chloroflexi_64_43_curated
OmpR family two-component response regulator id=2466130 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
two component transcriptional regulator, winged helix family
scnpilot_cont_500_p_scaffold_1474_3
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(2493..3269)
DNA (777bp) protein (259aa)
Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WI21_CHLAA
putative OmpR family two-component response regulator Tax=RBG_16_Chloroflexi_57_9_curated
winged helix family two component transcriptional regulator
scnpilot_cont_500_p_scaffold_1474_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(3420..4262)
DNA (843bp) protein (281aa)
Helix-turn-helix domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVI1_9CHLR
Helix-turn-helix domain protein {ECO:0000313|EMBL:EFH85384.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobact
DNA-binding protein
scnpilot_cont_500_p_scaffold_1474_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

4449..5183
DNA (735bp) protein (245aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2Y6_9CHLR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH82891.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonoba
short-chain dehydrogenase
scnpilot_cont_500_p_scaffold_1474_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5269..6174)
DNA (906bp) protein (302aa)
Trehalose/maltose transport system, permease protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FLC9_SORC5 rbh
thuG; trehalose/maltose transport system, permease
Trehalose/maltose transport system, permease protein {ECO:0000313|EMBL:CAN95202.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sora
scnpilot_cont_500_p_scaffold_1474_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6176..7108)
DNA (933bp) protein (311aa)
ABC transporter permease n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLG7_SORCE rbh
ABC transporter permease rbh
ABC transporter permease {ECO:0000313|EMBL:AGP32625.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium
scnpilot_cont_500_p_scaffold_1474_8
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(7352..8992)
DNA (1641bp) protein (547aa)
Extracellular solute-binding protein family 1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4S9_SPHTD rbh
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACZ39246.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae;
scnpilot_cont_500_p_scaffold_1474_9
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(9587..10606)
DNA (1020bp) protein (340aa)
LacI family transcriptional regulator (EC:5.1.1.1)
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACZ43110.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ACZ43110.1};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain
Transcriptional regulator, LacI family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH89_THET1 rbh
scnpilot_cont_500_p_scaffold_1474_10
unknown

Not on your lists

10693..10866
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1474_11
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11008..12498
DNA (1491bp) protein (497aa)
Intracellular exo-alpha-L-arabinofuranosidase 2 {ECO:0000313|EMBL:KHF36176.1}; EC=3.2.1.55 {ECO:0000313|EMBL:KHF36176.1};; TaxID=1472719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacill
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00035E9C43 rbh
xsa3; hypothetical protein
scnpilot_cont_500_p_scaffold_1474_12
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12598..13551)
DNA (954bp) protein (318aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PVC7_CATAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CDP48227.1}; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenr
alcohol dehydrogenase GroES domain-containing protein
scnpilot_cont_500_p_scaffold_1474_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(13674..14495)
DNA (822bp) protein (274aa)
oxidoreductase (EC:1.1.1.- 1.1.-.-)
6-phosphogluconate dehydrogenase NAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TF64_9CHLR rbh
6-phosphogluconate dehydrogenase NAD-binding {ECO:0000313|EMBL:EFH90464.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source
scnpilot_cont_500_p_scaffold_1474_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(14561..14950)
DNA (390bp) protein (130aa)
Transcriptional regulator, MerR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TF65_9CHLR
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EFH90465.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kted
transcriptional regulator
scnpilot_cont_500_p_scaffold_1474_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(15099..15659)
DNA (561bp) protein (187aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T39_SOLUE
deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ABJ87181.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" so
scnpilot_cont_500_p_scaffold_1474_16
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

16365..17030
DNA (666bp) protein (222aa)
Transcriptional regulator, AraC family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U222_9CHLR
AraC family transcriptional regulator {ECO:0000313|EMBL:KIJ72570.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61
hypothetical protein
scnpilot_cont_500_p_scaffold_1474_17
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(17079..18389)
DNA (1311bp) protein (437aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVX8_9CHLR rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH84361.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedono
tetA; tetracycline resistance protein, class C
scnpilot_cont_500_p_scaffold_1474_18
unknown

Not on your lists

18571..18780
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1474_19
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(18777..21803)
DNA (3027bp) protein (1009aa)
ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTV7_9CHLR rbh
ATP-dependent transcriptional regulator, MalT-like, LuxR family {ECO:0000313|EMBL:EFH83858.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Kted
ATP-dependent transcriptional regulator
scnpilot_cont_500_p_scaffold_1474_20
unknown

Not on your lists

22524..22952
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1474_21
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23193..24113
DNA (921bp) protein (307aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FQ70_PAEMK rbh
phytanoyl-CoA dioxygenase rbh
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:AEI40290.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strai
scnpilot_cont_500_p_scaffold_1474_22
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24215..25558)
DNA (1344bp) protein (448aa)
Putative uncharacterized protein id=3715715 bin=GWF2_Bacteroidetes_49_14 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) rbh
hypothetical protein Tax=GWF2_Bacteroidetes_49_14_curated
UDP-N-acetylmuramyl tripeptide synthase
scnpilot_cont_500_p_scaffold_1474_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25708..25947
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0U4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39013.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
scnpilot_cont_500_p_scaffold_1474_24
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

26066..26572
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z366_CYAAP
Uncharacterized protein {ECO:0000313|EMBL:KIE09781.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
hypothetical protein
Displaying 24 items

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