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scnpilot_cont_500_p_scaffold_2013

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2013_1
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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1..918
DNA (918bp) protein (306aa)
Carboxymethylenebutenolidase {ECO:0000313|EMBL:ADH62364.1}; EC=3.1.1.45 {ECO:0000313|EMBL:ADH62364.1};; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiother
Carboxymethylenebutenolidase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BI90_MEISD
carboxymethylenebutenolidase
scnpilot_cont_500_p_scaffold_2013_2
unknown

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1304..1438
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2013_3
unknown

Not on your lists

1528..2172
DNA (645bp) protein (215aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2013_4
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

2183..3298
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003663685
putative ribonuclease BN; K07058 membrane protein Tax=RBG_13_Chloroflexi_52_14_curated
putative ribonuclease BN
scnpilot_cont_500_p_scaffold_2013_5
Paramecium tetraurelia, Paramecium, Peniculida, Oligohymenophorea, Eukaryota

Not on your lists

comp(3270..3941)
DNA (672bp) protein (224aa)
Chromosome undetermined scaffold_112, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0BKH8_PARTE
hypothetical protein
Chromosome undetermined scaffold_112, whole genome shotgun sequence {ECO:0000313|EMBL:CAK59045.1}; TaxID=5888 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculi
scnpilot_cont_500_p_scaffold_2013_6
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4337..5137)
DNA (801bp) protein (267aa)
Transcriptional regulator n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6DAA5_9BACI
Transcriptional regulator {ECO:0000313|EMBL:EKN65259.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
GntR family transcriptional regulator
scnpilot_cont_500_p_scaffold_2013_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

5323..6876
DNA (1554bp) protein (518aa)
Pyrrolo-quinoline quinone n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4K3_9CHLR rbh
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:EFH81433.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source
Pyrrolo-quinoline quinone
scnpilot_cont_500_p_scaffold_2013_8
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

7153..7560
DNA (408bp) protein (136aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PQ57_9CYAN
two-component hybrid sensor and regulator Tax=RBG_13_Nitrospirae_39_12_curated
integral membrane sensor hybrid histidine kinase
scnpilot_cont_500_p_scaffold_2013_9
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(7671..9899)
DNA (2229bp) protein (743aa)
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDJ7_THET1 rbh
scnpilot_cont_500_p_scaffold_2013_10
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10232..11473)
DNA (1242bp) protein (414aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NFI5_9FIRM
Acetyl-CoA hydrolase/transferase {ECO:0000313|EMBL:EGO65184.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM
4-hydroxybutyrate CoA transferase
scnpilot_cont_500_p_scaffold_2013_11
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11515..12582)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z0S1_9NEIS rbh
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
membrane protein
scnpilot_cont_500_p_scaffold_2013_12
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(12767..13891)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A3H0_DEIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ67984.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinoco
scnpilot_cont_500_p_scaffold_2013_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

14263..15351
DNA (1089bp) protein (363aa)
Transcriptional regulator, LacI family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TV67_9CHLR
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFH84167.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kted
LacI family transcriptional regulator
scnpilot_cont_500_p_scaffold_2013_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15400..16785
DNA (1386bp) protein (462aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyan
UPI00034A3353 related cluster n=1 Tax=unknown RepID=UPI00034A3353 rbh
beta-glucosidase
scnpilot_cont_500_p_scaffold_2013_15
unknown

Not on your lists

comp(16973..17161)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2013_16
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(17438..18310)
DNA (873bp) protein (291aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|SAAS:SAAS00094434};; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci;
Queuosine biosynthesis protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BG87_MEISD rbh
Queuosine biosynthesis protein
Displaying 16 items

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