ggKbase home page

scnpilot_cont_500_p_scaffold_2035

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2035_1
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1000
DNA (999bp) protein (333aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Herbaspirillum sp. CF444 RepID=J3D5Q1_9BURK
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL85244.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
branched chain amino acid ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_2035_2
unknown

Not on your lists

comp(1328..2188)
DNA (861bp) protein (287aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2035_3
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

2515..4236
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0003062B76
Pentapeptide-repeat protein {ECO:0000313|EMBL:EKF02699.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
stress protein
scnpilot_cont_500_p_scaffold_2035_4
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4542..5441
DNA (900bp) protein (300aa)
Dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7U3_SPHTD
hypothetical protein Tax=CG_Desulfarul_01
scnpilot_cont_500_p_scaffold_2035_5
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

5737..8394
DNA (2658bp) protein (886aa)
hypothetical protein Tax=RBG_16_Chloroflexi_54_18_curated
hypothetical protein id=14629279 bin=bin8_Chloro species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
scnpilot_cont_500_p_scaffold_2035_6
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8457..10025)
DNA (1569bp) protein (523aa)
Carboxyl transferase n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QH18_DESB2 rbh
carboxyl transferase
Carboxyl transferase {ECO:0000313|EMBL:ADK84861.1}; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus baars
scnpilot_cont_500_p_scaffold_2035_7
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(10104..10928)
DNA (825bp) protein (275aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NMU2_ROSCS
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABU58866.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; R
scnpilot_cont_500_p_scaffold_2035_8
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

11277..12596
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5Y8_CALAS
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_2035_9
unknown

Not on your lists

comp(12782..13762)
DNA (981bp) protein (327aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2035_10
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13982..15040)
DNA (1059bp) protein (353aa)
ParB-like partition protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPK4_ROSS1
partition protein ParB-like; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
parB-like partition protein
scnpilot_cont_500_p_scaffold_2035_11
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15037..15258)
DNA (222bp) protein (74aa)
Type II secretory pathway, component ExeA {ECO:0000313|EMBL:EMS79481.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" s
Displaying 11 items

View Taxonomy