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scnpilot_cont_500_p_scaffold_2569

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2569_1
Leptospira wolffii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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1..459
DNA (459bp) protein (153aa)
Oxidoreductase, 2OG-Fe(II) oxygenase family protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3VSU9_9LEPT
Oxidoreductase, 2OG-Fe(II) oxygenase family protein {ECO:0000313|EMBL:EPG67139.1}; TaxID=1193069 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolffi
2OG-Fe(II) oxygenase
scnpilot_cont_500_p_scaffold_2569_2
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

520..1308
DNA (789bp) protein (263aa)
3,4-dihydroxyphenylalanine extradiol dioxygenase family protein YgiD n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EHK9_GEOBB
dioxygenase
Dioxygenase {ECO:0000313|EMBL:AJE03978.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
scnpilot_cont_500_p_scaffold_2569_3
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1419..2507)
DNA (1089bp) protein (363aa)
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYH2_9RHIZ rbh
Mandelate racemase {ECO:0000313|EMBL:KGM35796.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP
mandelate racemase
scnpilot_cont_500_p_scaffold_2569_4
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(2571..3434)
DNA (864bp) protein (288aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZV3_9BACT
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:CCW36632.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthon
scnpilot_cont_500_p_scaffold_2569_5
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3534..4301
DNA (768bp) protein (256aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C3C5_9PLAN
phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EDL60720.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.
scnpilot_cont_500_p_scaffold_2569_6
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4360..5325)
DNA (966bp) protein (322aa)
LAO/AO transporter ATPase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NLU8_9FIRM rbh
LAO/AO transport system ATPase
LAO/AO transport system ATPase {ECO:0000313|EMBL:AKA72417.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
scnpilot_cont_500_p_scaffold_2569_7
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(5331..5870)
DNA (540bp) protein (180aa)
Cobalamin B12-binding domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCR4_THET1
cobalamin B12-binding domain-containing protein
Cobalamin B12-binding domain protein {ECO:0000313|EMBL:ACZ42579.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
scnpilot_cont_500_p_scaffold_2569_8
Entamoeba invadens, Entamoeba, Eukaryota

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comp(5944..7089)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Entamoeba invadens RepID=S0AZG3_ENTIV
Uncharacterized protein {ECO:0000313|EMBL:BAN40683.1}; TaxID=33085 species="Eukaryota; Amoebozoa; Archamoebae; Entamoebidae; Entamoeba.;" source="Entamoeba invadens.;"
TPR repeat domain-containing protein
scnpilot_cont_500_p_scaffold_2569_9
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(7119..8093)
DNA (975bp) protein (325aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) rbh
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2H3_THERP rbh
scnpilot_cont_500_p_scaffold_2569_10
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(8177..8875)
DNA (699bp) protein (233aa)
tmk; thymidylate kinase Tmk (EC:2.7.4.9) Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
Tmk: thymidylate kinase id=4209198 bin=GWF2_CPR3_35_18 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_CPR3_35_18 organism_group=CPR3
thymidylate kinase
scnpilot_cont_500_p_scaffold_2569_11
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

9087..10094
DNA (1008bp) protein (336aa)
leuB1; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
Isocitrate/isopropylmalate dehydrogenase family protein id=2282503 bin=GWB2_Chloroflexi_54_36 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81 rbh
Tax=BJP_IG2157_Anaerolineales_55_23
scnpilot_cont_500_p_scaffold_2569_12

Not on your lists

10850..11818
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6S1_9CHLR
Marine sediment metagenome DNA, contig: S01H1_L03594 {ECO:0000313|EMBL:GAF73068.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
scnpilot_cont_500_p_scaffold_2569_13
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

12238..12987
DNA (750bp) protein (250aa)
hypothetical protein
Uncharacterized protein id=3816337 bin=GWC2_Chloroflexi_49_37 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
integral membrane protein-like protein Tax=GWC2_Chloroflexi_49_37_curated
Displaying 13 items

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