ggKbase home page

scnpilot_cont_500_p_scaffold_1019

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1019_1
unknown

Not on your lists

comp(3..821)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036BB8D7
scnpilot_cont_500_p_scaffold_1019_2
unknown

Not on your lists

comp(912..2687)
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00035E95AF rbh
scnpilot_cont_500_p_scaffold_1019_3
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2696..3238)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00035E95AF
TonB-dependent receptor plug {ECO:0000313|EMBL:EQB25861.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.
TonB-dependent receptor plug
scnpilot_cont_500_p_scaffold_1019_4
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3763..4677)
DNA (915bp) protein (305aa)
Transcriptional regulator n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z165_9RHOO
Transcriptional regulator {ECO:0000313|EMBL:ENO88337.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47
GntR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1019_5
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4907..6340
DNA (1434bp) protein (478aa)
XRE family transcriptional regulator n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YXV6_9RHOO rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:ENO86968.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linal
hypothetical protein
scnpilot_cont_500_p_scaffold_1019_6
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6369..9146)
DNA (2778bp) protein (926aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteri
Ribonucleoside-diphosphate reductase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHF3_AZOSU rbh
ribonucleoside-diphosphate reductase subunit alpha
scnpilot_cont_500_p_scaffold_1019_7
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9602..10963)
DNA (1362bp) protein (454aa)
Uncharacterized protein conserved in bacteria (DUF2325) n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFI0_AZOSU rbh
hypothetical protein rbh
Uncharacterized protein conserved in bacteria (DUF2325) {ECO:0000313|EMBL:AEV26046.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" so
scnpilot_cont_500_p_scaffold_1019_8
unknown

Not on your lists

comp(10988..11323)
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1019_9
unknown

Not on your lists

comp(11320..11574)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1019_10
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12399..13202)
DNA (804bp) protein (268aa)
ABC-type Co2+ transport system, periplasmic component n=1 Tax=Acidovorax sp. CF316 RepID=J1EE79_9BURK
ABC-type Co2+ transport system, periplasmic component {ECO:0000313|EMBL:EJE50539.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
nickel transport complex transmembrane protein NikM
scnpilot_cont_500_p_scaffold_1019_11
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13231..13755)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034A60BB
putative exported protein
Uncharacterized protein {ECO:0000313|EMBL:EHP41735.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basile
scnpilot_cont_500_p_scaffold_1019_12
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13776..14432)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFI6_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV26052.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain AT
scnpilot_cont_500_p_scaffold_1019_13
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14463..16706)
DNA (2244bp) protein (748aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein id=12497108 bin=THIO_MID species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
TonB-dependent receptor {ECO:0000313|EMBL:ENO88624.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lo
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_1019_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17431..19527
DNA (2097bp) protein (699aa)
Hemin receptor, TonB-dependent outer membrane uptake protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFR2_THIDA rbh
hemin receptor , TonB-dependent outer membrane uptake protein
Hemin receptor, TonB-dependent outer membrane uptake protein {ECO:0000313|EMBL:AAZ98544.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hy
scnpilot_cont_500_p_scaffold_1019_15
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19610..20656
DNA (1047bp) protein (349aa)
ABC transporter substrate-binding protein n=1 Tax=Thauera terpenica 58Eu RepID=T0ATP9_9RHOO rbh
periplasmic component of ABC-type transport system; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
NnrS family protein
scnpilot_cont_500_p_scaffold_1019_16
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20653..21444
DNA (792bp) protein (264aa)
Putative ABC transporter, permease protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5W9_AROAE rbh
ABC transporter permease
Putative ABC transporter, permease protein {ECO:0000313|EMBL:CAI07292.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aroma
scnpilot_cont_500_p_scaffold_1019_17
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21434..22288
DNA (855bp) protein (285aa)
ATPase component ABC-type transport system n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5X0_AROAE rbh
ATPase component ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
ATPase component ABC transporter rbh
scnpilot_cont_500_p_scaffold_1019_18
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22282..23544
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5X1_AROAE rbh
hypothetical protein; K07234 uncharacterized protein involved in response to NO Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_1019_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23585..24493)
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas fuscovaginae RepID=UPI000317BB0F rbh
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1019_20
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24703..26004
DNA (1302bp) protein (434aa)
Outer membrane protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIE4_AZOSU rbh
outer membrane protein rbh
Outer membrane protein {ECO:0000313|EMBL:AEV25304.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira
scnpilot_cont_500_p_scaffold_1019_21
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26009..27181
DNA (1173bp) protein (391aa)
RND family efflux transporter, MFP subunit n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIE3_AZOSU rbh
RND family efflux transporter, MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AEV25303.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira
scnpilot_cont_500_p_scaffold_1019_22
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27178..28212
DNA (1035bp) protein (345aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIE2_AZOSU
heavy metal efflux pump
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AEV25302.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospi
Displaying 22 items

View Taxonomy