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scnpilot_cont_500_p_scaffold_1025

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1025_1
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20..580
DNA (561bp) protein (187aa)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KFB71020.1}; EC=3.6.1.13 {ECO:0000313|EMBL:KFB71020.1};; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;"
NUDIX hydrolase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RL68_ACCPU
NUDIX hydrolase
scnpilot_cont_500_p_scaffold_1025_2
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(584..979)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037255D3
putative endonuclease containing a URI domain
Putative endonuclease containing a URI domain {ECO:0000313|EMBL:AEV26399.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azos
scnpilot_cont_500_p_scaffold_1025_3
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(996..1895)
DNA (900bp) protein (300aa)
Recombination-associated protein RdgC n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVL7_ACCPU rbh
putative exonuclease RdgC
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;"
scnpilot_cont_500_p_scaffold_1025_4
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2026..4911)
DNA (2886bp) protein (962aa)
Ribonucleoside-diphosphate reductase NrdZ {ECO:0000313|EMBL:EXI85522.1}; EC=1.17.4.1 {ECO:0000313|EMBL:EXI85522.1};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Acc
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPU6_ACCPU rbh
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
scnpilot_cont_500_p_scaffold_1025_5
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5290..6138)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJN5_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV26509.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain AT
scnpilot_cont_500_p_scaffold_1025_6
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6131..6775)
DNA (645bp) protein (215aa)
Flagellar motor protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJ90_AZOSU rbh
flagellar motor protein rbh
Flagellar motor protein {ECO:0000313|EMBL:AEV26508.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain AT
scnpilot_cont_500_p_scaffold_1025_7
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6775..8703)
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RK91_ACCPU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV33682.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosph
scnpilot_cont_500_p_scaffold_1025_8
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8700..9542)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q4Q5_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL26968.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
scnpilot_cont_500_p_scaffold_1025_9
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9909..11270)
DNA (1362bp) protein (454aa)
Sensory box/GGDEF family protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQ85_9BURK
Diguanylate phosphodiesterase {ECO:0000313|EMBL:EYC50386.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gr
sensory box/GGDEF family protein
scnpilot_cont_500_p_scaffold_1025_10
unknown

Not on your lists

comp(11267..11794)
DNA (528bp) protein (176aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1025_11
Pseudomonas frederiksbergensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11895..12788)
DNA (894bp) protein (298aa)
cheR2; protein CheR2 (EC:2.1.1.80)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales
Chemotaxis protein methyltransferase n=1 Tax=Pseudomonas fluorescens F113 RepID=G8QAF7_PSEFL
scnpilot_cont_500_p_scaffold_1025_12
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12799..13353)
DNA (555bp) protein (185aa)
CheW protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJ91_ACCPU
CheW protein
CheW protein {ECO:0000313|EMBL:ACV36702.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_cont_500_p_scaffold_1025_13
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13363..15537)
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AUQ4_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPZ16549.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
methyl-accepting chemotaxis sensory transducer
scnpilot_cont_500_p_scaffold_1025_14
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15565..17865)
DNA (2301bp) protein (767aa)
cheA1; putative chemotaxis protein histidine kinase (EC:2.7.13.1)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarc
Putative chemotaxis protein histidine kinase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K2H0_AZOSB
scnpilot_cont_500_p_scaffold_1025_15
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17879..18226)
DNA (348bp) protein (116aa)
Sulfate transporter/antisigma-factor antagonist STAS n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IVF8_9GAMM
STAS domain-containing protein Tax=GWA2_Gallionellales_60_18_curated
anti-sigma-factor antagonist
scnpilot_cont_500_p_scaffold_1025_16
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18258..18635)
DNA (378bp) protein (126aa)
chemotaxis protein CheY n=1 Tax=Methylomonas sp. MK1 RepID=UPI00035C4E7F
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEG02334.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methy
scnpilot_cont_500_p_scaffold_1025_17
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18647..19840)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2IMT1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ENA28712.1}; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. H
methyl-accepting chemotaxis sensory transducer
scnpilot_cont_500_p_scaffold_1025_18
unknown

Not on your lists

comp(19837..20208)
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1025_19
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20419..21165)
DNA (747bp) protein (249aa)
transcriptional regulator n=1 Tax=Burkholderia kururiensis RepID=UPI00034CC319
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADG19858.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.
scnpilot_cont_500_p_scaffold_1025_20
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21162..23447)
DNA (2286bp) protein (762aa)
Histidine kinase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QXK4_RALPI
histidine kinase
Tax=BJP_IG2103_Dechloromonas_60_92
scnpilot_cont_500_p_scaffold_1025_21
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23745..24926)
DNA (1182bp) protein (394aa)
acetate kinase (EC:2.7.2.1)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=159087 species="Bacteria; Proteobacteria; Betaprot
Acetate kinase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HF1_DECAR rbh
scnpilot_cont_500_p_scaffold_1025_22
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24923..26344)
DNA (1422bp) protein (474aa)
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase (EC:2.3.1.8) rbh
Phosphate acetyltransferase {ECO:0000313|EMBL:ACV34338.1}; EC=2.3.1.8 {ECO:0000313|EMBL:ACV34338.1};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" s
Phosphate acetyltransferase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPU5_ACCPU rbh
scnpilot_cont_500_p_scaffold_1025_23
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26631..28595
DNA (1965bp) protein (655aa)
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HE6_DECAR rbh
NADH dehydrogenase
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit {ECO:0000313|EMBL:AAZ45735.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; D
scnpilot_cont_500_p_scaffold_1025_24
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28592..29314
DNA (723bp) protein (241aa)
Ferredoxin n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HE5_DECAR rbh
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AAZ45736.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RC
scnpilot_cont_500_p_scaffold_1025_25
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29316..29876
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FFL5_9BACT rbh
NADH ubiquinone oxidoreductase 20 kDa subunit
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_cont_500_p_scaffold_1025_26
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29887..31362
DNA (1476bp) protein (492aa)
NAD(P)-dependent nickel-iron dehydrogenase catalytic subunit n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HE3_DECAR rbh
nickel-dependent hydrogenase, large subunit
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_cont_500_p_scaffold_1025_27
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31359..31904
DNA (546bp) protein (182aa)
Hydrogenase maturation protease n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPU0_ACCPU
Hydrogenase maturation protease {ECO:0000313|EMBL:EXI85528.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. B
hydrogenase maturation protease
scnpilot_cont_500_p_scaffold_1025_28
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31955..32938
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI00035F0557 rbh
multidrug resistance efflux pump
Secretion protein HlyD {ECO:0000313|EMBL:AAZ45742.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dec
scnpilot_cont_500_p_scaffold_1025_29
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32959..35157
DNA (2199bp) protein (733aa)
ABC-2:ABC transporter related protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HD8_DECAR rbh
ABC transporter
ABC-2:ABC transporter related protein {ECO:0000313|EMBL:AAZ45743.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechlor
Displaying 29 items

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