ggKbase home page

scnpilot_cont_500_p_scaffold_243

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_243_1
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..910
DNA (909bp) protein (303aa)
Ferredoxin-type protein, NapH/MauN family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM80_ACCPU rbh
napH; quinol dehydrogenase membrane component
Tax=BJP_IG2103_Dechloromonas_60_92
scnpilot_cont_500_p_scaffold_243_2
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

960..1433
DNA (474bp) protein (158aa)
Periplasmic nitrate reductase, electron transfer subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM81_ACCPU
Nitrate reductase cytochrome c-type subunit (NapB)
Periplasmic nitrate reductase, electron transfer subunit {ECO:0000256|PIRNR:PIRNR006105}; Diheme cytochrome c NapB {ECO:0000256|PIRNR:PIRNR006105}; Flags: Precursor;; TaxID=522306 species="Bacteria; P
scnpilot_cont_500_p_scaffold_243_3
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1540..2022)
DNA (483bp) protein (161aa)
Ferredoxin-type protein NapF n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM83_ACCPU
Ferredoxin-type protein {ECO:0000313|EMBL:EXI64346.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
ferredoxin-type protein NapF
scnpilot_cont_500_p_scaffold_243_4
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2182..3018)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMN5_ACCPU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV34062.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosph
scnpilot_cont_500_p_scaffold_243_5
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3126..3713)
DNA (588bp) protein (196aa)
Periplasmic nitrate/nitrite reductase c-type cytochrome, NapC/NirT family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKX3_AZOSU rbh
Cytochrome c-type protein {ECO:0000256|PIRNR:PIRNR000013}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92
periplasmic nitrate/nitrite reductase c-type cytochrome, NapC/NirT family
scnpilot_cont_500_p_scaffold_243_6
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3974..5167)
DNA (1194bp) protein (398aa)
Cytochrome c-type biogenesis protein CcmI n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMN9_ACCPU rbh
cytochrome c-type biogenesis protein CcmI
Cytochrome c-type biogenesis protein CcmI {ECO:0000313|EMBL:ACV34066.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Acc
scnpilot_cont_500_p_scaffold_243_7
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5164..5631)
DNA (468bp) protein (156aa)
Cytochrome c biogenesis protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMP0_ACCPU
cytochrome c biogenesis protein
Cytochrome c biogenesis protein {ECO:0000313|EMBL:ACV34067.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacte
scnpilot_cont_500_p_scaffold_243_8
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5628..6212)
DNA (585bp) protein (195aa)
Periplasmic protein thiol/disulphide oxidoreductase DsbE n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMP1_ACCPU rbh
periplasmic protein thiol/disulfide oxidoreductase DsbE
Periplasmic protein thiol/disulphide oxidoreductase DsbE {ECO:0000313|EMBL:ACV34068.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter
scnpilot_cont_500_p_scaffold_243_9
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6265..8256)
DNA (1992bp) protein (664aa)
Cytochrome c-type biogenesis protein CcmF n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMP2_ACCPU rbh
Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:ACV34069.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phospha
cytochrome c-type biogenesis protein CcmF rbh
scnpilot_cont_500_p_scaffold_243_10
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8279..8758)
DNA (480bp) protein (160aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMP3_ACCPU
CcmE/CycJ protein
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959};
scnpilot_cont_500_p_scaffold_243_11
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8755..8973)
DNA (219bp) protein (73aa)
Heme exporter protein CcmD n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMP4_ACCPU
Heme exporter protein CcmD {ECO:0000313|EMBL:EXI86759.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.
heme exporter protein CcmD
scnpilot_cont_500_p_scaffold_243_12
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8978..9739)
DNA (762bp) protein (254aa)
Heme exporter protein CcmC n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMP5_ACCPU rbh
heme exporter protein CcmC rbh
Heme exporter protein CcmC {ECO:0000313|EMBL:ACV34072.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-
scnpilot_cont_500_p_scaffold_243_13
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9773..10441)
DNA (669bp) protein (223aa)
Heme exporter protein B n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMP6_ACCPU rbh
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;
heme exporter protein CcmB
scnpilot_cont_500_p_scaffold_243_14
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10446..11060)
DNA (615bp) protein (205aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Ta
Heme exporter protein CcmA n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMP7_ACCPU rbh
cytochrome c biogenesis protein CcmA
scnpilot_cont_500_p_scaffold_243_15
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11192..12190
DNA (999bp) protein (333aa)
Putative hydrogenase expression/formation protein HupK n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMP8_ACCPU rbh
Coenzyme F420-reducing hydrogenase, alpha subunit {ECO:0000313|EMBL:EXI86755.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Ac
putative hydrogenase expression/formation protein HupK
scnpilot_cont_500_p_scaffold_243_16
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12183..12524
DNA (342bp) protein (114aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMP9_ACCPU
hydrogenase nickel insertion protein HypA
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accum
scnpilot_cont_500_p_scaffold_243_17
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12551..13579
DNA (1029bp) protein (343aa)
Hydrogenase accessory protein HypB n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKW0_AZOSU rbh
hydrogenase nickel incorporation protein HypB
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:AEV25565.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae
scnpilot_cont_500_p_scaffold_243_18
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13587..15914
DNA (2328bp) protein (776aa)
(NiFe) hydrogenase maturation protein HypF n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMQ1_ACCPU rbh
(NiFe) hydrogenase maturation protein HypF {ECO:0000313|EMBL:ACV34078.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosph
(NiFe) hydrogenase maturation protein HypF
scnpilot_cont_500_p_scaffold_243_19
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15916..16164
DNA (249bp) protein (83aa)
Hydrogenase assembly chaperone hypC/hupF n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMQ2_ACCPU
Hydrogenase isoenzymes formation protein HypC {ECO:0000313|EMBL:KFB66137.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumu
hydrogenase assembly chaperone HypC/HupF
scnpilot_cont_500_p_scaffold_243_20
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16175..17314
DNA (1140bp) protein (380aa)
Hydrogenase formation HypD protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q478N8_DECAR rbh
hydrogenase formation HypD protein
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_cont_500_p_scaffold_243_21
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17311..18402
DNA (1092bp) protein (364aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMQ4_ACCPU rbh
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EXI77493.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumu
hydrogenase expression/formation protein HypE
scnpilot_cont_500_p_scaffold_243_22
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18428..18634)
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:AEV25559.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain AT
scnpilot_cont_500_p_scaffold_243_23
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18846..20612
DNA (1767bp) protein (589aa)
Methionyl-tRNA formyltransferase {ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|SAAS:SAAS00150580};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulib
Formyl transferase domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMQ5_ACCPU rbh
formyl transferase domain-containing protein
scnpilot_cont_500_p_scaffold_243_24
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20609..22072
DNA (1464bp) protein (488aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMQ6_ACCPU rbh
Hydrogenase transcriptional regulatory protein hupR1 {ECO:0000313|EMBL:KFB66292.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus
two component sigma-54 specific Fis family transcriptional regulator rbh
scnpilot_cont_500_p_scaffold_243_25
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22072..23097
DNA (1026bp) protein (342aa)
Ferredoxin hydrogenase, small subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMQ7_ACCPU rbh
ferredoxin hydrogenase small subunit
Ferredoxin hydrogenase, small subunit {ECO:0000313|EMBL:ACV34084.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumul
scnpilot_cont_500_p_scaffold_243_26
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23108..24583
DNA (1476bp) protein (492aa)
Periplasmic [NiFeSe] hydrogenase large subunit {ECO:0000313|EMBL:EXI86745.1}; EC=1.12.99.6 {ECO:0000313|EMBL:EXI86745.1};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidat
Nickel-dependent hydrogenase large subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMQ8_ACCPU rbh
nickel-dependent hydrogenase large subunit rbh
scnpilot_cont_500_p_scaffold_243_27
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24617..25714)
DNA (1098bp) protein (366aa)
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; Flags: Pre
Phosphoserine aminotransferase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y6S6_THIV6 rbh
scnpilot_cont_500_p_scaffold_243_28
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25715..26953)
DNA (1239bp) protein (413aa)
Glutathione synthase/ribosomal protein S6 modification enzyme (Glutaminyl transferase) n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y6S7_THIV6 rbh
glutathione synthase/ribosomal protein S6 modification protein rbh
Glutathione synthase/ribosomal protein S6 modification enzyme (Glutaminyl transferase) {ECO:0000313|EMBL:AFL72695.1}; Flags: Precursor;; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobact
scnpilot_cont_500_p_scaffold_243_29
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27236..27727
DNA (492bp) protein (164aa)
Putative nickel-responsive regulator n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKU5_AZOSU
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira
scnpilot_cont_500_p_scaffold_243_30
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27918..29342
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source=
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQ00_ACCPU rbh
PAS/PAC sensor signal transduction histidine kinase
Displaying items 1-30 of 55 in total

View Taxonomy