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scnpilot_cont_500_p_scaffold_708

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_708_1
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..376)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4U2_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB34655.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodni
scnpilot_cont_500_p_scaffold_708_2
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

565..990
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00035D72B5
UPF0225 protein AW10_01053 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA
SEC-C motif domain-containing protein
scnpilot_cont_500_p_scaffold_708_3
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

987..2969
DNA (1983bp) protein (661aa)
HI0933-like protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BN3_DECAR rbh
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_cont_500_p_scaffold_708_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3076..3441
DNA (366bp) protein (122aa)
Response regulator receiver n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GY6_DECAR
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AAZ45895.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aro
scnpilot_cont_500_p_scaffold_708_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3463..4725
DNA (1263bp) protein (421aa)
Chemotaxis sensory transducer n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GY5_DECAR rbh
chemotaxis sensory transducer
Chemotaxis sensory transducer {ECO:0000313|EMBL:AAZ45896.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas a
scnpilot_cont_500_p_scaffold_708_6
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4737..5042
DNA (306bp) protein (102aa)
Sulfate transporter/antisigma-factor antagonist STAS n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GY4_DECAR
Sulfate transporter/antisigma-factor antagonist STAS
Sulfate transporter/antisigma-factor antagonist STAS {ECO:0000313|EMBL:AAZ45897.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;"
scnpilot_cont_500_p_scaffold_708_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5064..7277
DNA (2214bp) protein (738aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechl
CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GY3_DECAR rbh
chemotaxis protein CheW
scnpilot_cont_500_p_scaffold_708_8
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7323..8945
DNA (1623bp) protein (541aa)
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GY2_DECAR rbh
histidine kinase, HAMP region: chemotaxis sensory transducer
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer {ECO:0000313|EMBL:AAZ45899.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclale
scnpilot_cont_500_p_scaffold_708_9
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8957..9517
DNA (561bp) protein (187aa)
CheW-like protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GY1_DECAR
chemotaxis protein CheW
CheW-like protein {ECO:0000313|EMBL:AAZ45900.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (st
scnpilot_cont_500_p_scaffold_708_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9592..10185
DNA (594bp) protein (198aa)
Probable chemoreceptor glutamine deamidase CheD 2 {ECO:0000255|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000255|HAMAP-Rule:MF_01440};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria;
Probable chemoreceptor glutamine deamidase CheD 2 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=CHED2_DECAR rbh
hypothetical protein
scnpilot_cont_500_p_scaffold_708_11
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10185..10994
DNA (810bp) protein (270aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; R
Chemotaxis protein methyltransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GX9_DECAR rbh
chemotaxis protein CheR
scnpilot_cont_500_p_scaffold_708_12
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10991..11518
DNA (528bp) protein (176aa)
Probable chemoreceptor glutamine deamidase CheD 3 {ECO:0000255|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000255|HAMAP-Rule:MF_01440};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria;
Probable chemoreceptor glutamine deamidase CheD 3 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=CHED3_DECAR
chemotaxis protein
scnpilot_cont_500_p_scaffold_708_13
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11511..12623
DNA (1113bp) protein (371aa)
chemotaxis-specific methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase 2 {ECO:0000255|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000255|HAMAP-Rule:MF_00099};; TaxID=159087 species="Bacteria; Proteobacteria; Beta
Chemotaxis response regulator protein-glutamate methylesterase 2 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=CHEB2_DECAR rbh
scnpilot_cont_500_p_scaffold_708_14
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12784..13650
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037F6BC7 rbh
HDOD domain protein {ECO:0000313|EMBL:EXI85005.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
putative signal transduction protein
scnpilot_cont_500_p_scaffold_708_15
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13679..14053
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHC5_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV26270.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain AT
scnpilot_cont_500_p_scaffold_708_16
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14096..14995
DNA (900bp) protein (300aa)
E3 Ubiquitin ligase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHC4_AZOSU rbh
E3 Ubiquitin ligase
hypothetical protein Tax=RBG_16_Betaproteobacteria_56_24_curated
scnpilot_cont_500_p_scaffold_708_17
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15176..16333
DNA (1158bp) protein (386aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHH7_AZOSU rbh
diguanylate cyclase domain-containing protein
Diguanylate cyclase {ECO:0000313|EMBL:KIF82102.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. T
scnpilot_cont_500_p_scaffold_708_18
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16378..18012
DNA (1635bp) protein (545aa)
PAS protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GB9_DECAR rbh
PAS
PAS protein {ECO:0000313|EMBL:AAZ46112.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain R
scnpilot_cont_500_p_scaffold_708_19
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18156..19040
DNA (885bp) protein (295aa)
Patatin n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR55_ACCPU rbh
Patatin
Patatin {ECO:0000313|EMBL:ACV35736.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-
scnpilot_cont_500_p_scaffold_708_20
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19204..19620)
DNA (417bp) protein (139aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLD4_AZOSU
HIT family hydrolase, diadenosine tetraphosphate hydrolase
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:AEV24463.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;"
scnpilot_cont_500_p_scaffold_708_21
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19754..21682)
DNA (1929bp) protein (643aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037F1328 rbh
ABC transporter ATP-binding protein uup {ECO:0000313|EMBL:EXI81721.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibact
ABC transporter
scnpilot_cont_500_p_scaffold_708_22
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21689..22258)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000382D4A1
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:EYC52346.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gr
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
scnpilot_cont_500_p_scaffold_708_23
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22352..22567)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TAQ5_BURSG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC23300.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.
scnpilot_cont_500_p_scaffold_708_24
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22859..24223
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BIB2_RALP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS62748.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (
scnpilot_cont_500_p_scaffold_708_25
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24220..25329
DNA (1110bp) protein (370aa)
Methyltransferase n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PNQ4_9BURK rbh
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AHB04611.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;
scnpilot_cont_500_p_scaffold_708_26
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25376..27415)
DNA (2040bp) protein (680aa)
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HT8_DECAR rbh
histidine kinase, HAMP region: chemotaxis sensory transducer
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer {ECO:0000313|EMBL:AAZ45593.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclale
scnpilot_cont_500_p_scaffold_708_27
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27932..29185
DNA (1254bp) protein (418aa)
Prophage P4 integrase n=1 Tax=Pectobacterium sp. (strain SCC3193) RepID=K4FS72_PECSS
Integrase {ECO:0000313|EMBL:KFF61395.1}; TaxID=180957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovoru
Prophage P4 integrase
scnpilot_cont_500_p_scaffold_708_28
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29337..30653
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000379B406 rbh
HipA domain-containing protein Tax=CG_Hydro_01
hypothetical protein
scnpilot_cont_500_p_scaffold_708_29
unknown

Not on your lists

31224..32102
DNA (879bp) protein (293aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_708_30
Stenotrophomonas phage S1, Caudovirales, Viruses

Not on your lists

32224..32490
DNA (267bp) protein (89aa)
Gp29 n=1 Tax=Stenotrophomonas phage S1 RepID=B7SYF9_9CAUD
Gp29 {ECO:0000313|EMBL:ACJ24754.1}; TaxID=573591 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Stenotrophomonas phage S1.;"
phage transcriptional regulator, AlpA
Displaying items 1-30 of 43 in total

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