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scnpilot_cont_500_p_scaffold_1112

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1112_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..173)
DNA (171bp) protein (57aa)
membrane protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000360AB56
Permease of the drug/metabolite transporter (DMT) superfamily protein {ECO:0000313|EMBL:KFC68538.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiacea
EamA-like transporter family protein
scnpilot_cont_500_p_scaffold_1112_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(197..1237)
DNA (1041bp) protein (347aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
Aspartate-semialdehyde dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6E2_PELHB rbh
aspartate-semialdehyde dehydrogenase
scnpilot_cont_500_p_scaffold_1112_3
unknown

Not on your lists

comp(1336..1446)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1112_4
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1634..2812
DNA (1179bp) protein (393aa)
HI0933 family protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJM0_CAUST rbh
Membrane protein {ECO:0000313|EMBL:KKB06854.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1112_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2872..3864
DNA (993bp) protein (331aa)
Luciferase-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6D8_PELHB rbh
5,10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:KFL27762.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source=
luciferase-like protein
scnpilot_cont_500_p_scaffold_1112_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4044..4352)
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP53503.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
scnpilot_cont_500_p_scaffold_1112_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4412..4711)
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB86238.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
scnpilot_cont_500_p_scaffold_1112_8
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4784..5563)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6X1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC33462.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1112_9
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5566..6906)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6X2_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB13781.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1112_10
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7040..7753)
DNA (714bp) protein (238aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=443610 species="Bacteria
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6D2_PELHB rbh
purine nucleoside phosphorylase
scnpilot_cont_500_p_scaffold_1112_11
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7860..8810
DNA (951bp) protein (317aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110};; N-acetyl-glutamate semiald
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IZG8_POLGS rbh
N-acetyl-gamma-glutamyl-phosphate reductase 2
scnpilot_cont_500_p_scaffold_1112_12
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8901..9374)
DNA (474bp) protein (158aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterale
Prolyl-tRNA synthetase n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PJN2_9CAUL
ybak/ebsc protein
scnpilot_cont_500_p_scaffold_1112_13
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9460..9876)
DNA (417bp) protein (139aa)
Acetylglutamate kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6W8_PELHB
Zn-dependent protease {ECO:0000313|EMBL:KKB13786.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
acetylglutamate kinase
scnpilot_cont_500_p_scaffold_1112_14
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9922..11322)
DNA (1401bp) protein (467aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase large subunit n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=LEUC_SINMW
isopropylmalate isomerase large subunit
scnpilot_cont_500_p_scaffold_1112_15
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11405..12751)
DNA (1347bp) protein (449aa)
Polysaccharide biosynthesis associate n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGV9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB86275.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
polysaccharide biosynthesis associate
scnpilot_cont_500_p_scaffold_1112_16
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12873..17195
DNA (4323bp) protein (1441aa)
NAD-specific glutamate dehydrogenase, large form n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6W5_PELHB rbh
NAD-glutamate dehydrogenase {ECO:0000313|EMBL:KKB12317.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
NAD-specific glutamate dehydrogenase
scnpilot_cont_500_p_scaffold_1112_17
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17243..17584
DNA (342bp) protein (114aa)
NAD-specific glutamate dehydrogenase, large form n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6W5_PELHB
NAD-glutamate dehydrogenase {ECO:0000313|EMBL:KKB12317.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
NAD-specific glutamate dehydrogenase
scnpilot_cont_500_p_scaffold_1112_18
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17639..17872
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMU1_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ89869.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22
scnpilot_cont_500_p_scaffold_1112_19
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17869..18258
DNA (390bp) protein (130aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EJ99_METSB
PilT protein domain-containing protein
scnpilot_cont_500_p_scaffold_1112_20
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18259..19845)
DNA (1587bp) protein (529aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=PUR9_MESSB
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomi
scnpilot_cont_500_p_scaffold_1112_21
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19926..21728)
DNA (1803bp) protein (601aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031FD481
ABC transporter family protein {ECO:0000313|EMBL:AID30312.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
ABC transporter
scnpilot_cont_500_p_scaffold_1112_22
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21996..22376
DNA (381bp) protein (127aa)
Bleomycin resistance protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCH5_9RHIZ
bleomycin resistance protein
Bleomycin resistance protein {ECO:0000313|EMBL:AHB47669.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobi
scnpilot_cont_500_p_scaffold_1112_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22633..23238
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Rhizobium sp. CF080 RepID=J3BUX4_9RHIZ rbh
3-isopropylmalate dehydratase small subunit
scnpilot_cont_500_p_scaffold_1112_24
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23436..23819)
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL29608.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
GreA/GreB family elongation factor
scnpilot_cont_500_p_scaffold_1112_25
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24001..25266
DNA (1266bp) protein (422aa)
glutamate dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003713057
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glutamate dehydrogenase
scnpilot_cont_500_p_scaffold_1112_26
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25405..26502
DNA (1098bp) protein (366aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6D5_PELHB rbh
3-isopropylmalate dehydrogenase
scnpilot_cont_500_p_scaffold_1112_27
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26499..28136)
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6E8_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB86272.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_cont_500_p_scaffold_1112_28
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28196..29479)
DNA (1284bp) protein (428aa)
16S rRNA m(5)C 967 methyltransferase {ECO:0000313|EMBL:CDP53522.1}; EC=2.1.1.- {ECO:0000313|EMBL:CDP53522.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphom
16S rRNA m(5)C 967 methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6E9_PELHB rbh
16S rRNA m(5)C 967 methyltransferase
scnpilot_cont_500_p_scaffold_1112_29
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29483..29914)
DNA (432bp) protein (144aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobia
Protease HtpX homolog n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89SF0_BRADU
htpx; heat shock protein HtpX
scnpilot_cont_500_p_scaffold_1112_30
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30445..30663
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037490F8
Uncharacterized protein {ECO:0000313|EMBL:KKB10835.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
Displaying items 1-30 of 58 in total

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