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scnpilot_cont_500_p_scaffold_1288

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1288_1
unknown

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1..141
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1288_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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342..1163
DNA (822bp) protein (274aa)
Putative polysaccharide deacetylase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YFQ2_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:KKB77298.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
polysaccharide deacetylase
scnpilot_cont_500_p_scaffold_1288_3
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1415..2416
DNA (1002bp) protein (334aa)
UPI0003CE67AD related cluster n=1 Tax=unknown RepID=UPI0003CE67AD rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:ESY80864.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
LacI family transcriptional regulator rbh
scnpilot_cont_500_p_scaffold_1288_4
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2436..3758
DNA (1323bp) protein (441aa)
Extracellular solute-binding protein family 1 n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YAQ8_MESOW rbh
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AEH88818.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Me
scnpilot_cont_500_p_scaffold_1288_5
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3819..4745
DNA (927bp) protein (309aa)
UPI0003CE7969 related cluster n=1 Tax=unknown RepID=UPI0003CE7969
Sugar-binding protein {ECO:0000313|EMBL:KKC31750.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
binding-protein-dependent transport systems inner membrane component
scnpilot_cont_500_p_scaffold_1288_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4742..5575
DNA (834bp) protein (278aa)
UPI0003CE9ED1 related cluster n=1 Tax=unknown RepID=UPI0003CE9ED1
Sugar ABC transporter permease {ECO:0000313|EMBL:KKB12225.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.
binding-protein-dependent transport systems inner membrane component
scnpilot_cont_500_p_scaffold_1288_7
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5602..7719
DNA (2118bp) protein (706aa)
UPI0003CEC22B related cluster n=1 Tax=unknown RepID=UPI0003CEC22B rbh
Crystallin {ECO:0000313|EMBL:ESY80868.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;
ADP-ribosylation/Crystallin J1
scnpilot_cont_500_p_scaffold_1288_8
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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8017..9144
DNA (1128bp) protein (376aa)
ABC transporter, periplasmic substrate-binding protein, putative id=4019323 bin=GWC2_Chloroflexi_73_18 species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
ABC transporter periplasmic protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_1288_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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9148..10065
DNA (918bp) protein (306aa)
Binding-protein-dependent transport systems inner membrane component id=4019322 bin=GWC2_Chloroflexi_73_18 species=Mycobacterium vanbaalenii genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
binding-protein-dependent transport system inner membrane protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter permease
scnpilot_cont_500_p_scaffold_1288_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

10053..10889
DNA (837bp) protein (279aa)
ABC transporter, permease protein, putative id=4019228 bin=GWC2_Chloroflexi_73_18 species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
molybdate ABC transporter, permease protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter permease
scnpilot_cont_500_p_scaffold_1288_11
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

10886..11935
DNA (1050bp) protein (350aa)
ABC transporter-related protein id=4019226 bin=GWC2_Chloroflexi_73_18 species=Mycobacterium vanbaalenii genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
ABC transporter--like protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter--like protein
scnpilot_cont_500_p_scaffold_1288_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11932..13455
DNA (1524bp) protein (508aa)
Sulfatase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K7I4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KGM30881.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
sulfatase
scnpilot_cont_500_p_scaffold_1288_13
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13518..14897)
DNA (1380bp) protein (460aa)
4-aminobutyrate aminotransferase apoenzyme {ECO:0000313|EMBL:AKI00880.1}; EC=2.6.1.19 {ECO:0000313|EMBL:AKI00880.1};; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
4-aminobutyrate aminotransferase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B513E9 rbh
class III aminotransferase
scnpilot_cont_500_p_scaffold_1288_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14958..16415)
DNA (1458bp) protein (486aa)
phosphonoacetaldehyde dehydrogenase (EC:1.2.1.22)
Phosphonoacetaldehyde dehydrogenase n=3 Tax=Rhizobium meliloti RepID=F6C403_SINMB rbh
Phosphonoacetaldehyde dehydrogenase {ECO:0000313|EMBL:CDX32921.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
scnpilot_cont_500_p_scaffold_1288_15
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16426..17682)
DNA (1257bp) protein (419aa)
phosphonoacetate hydrolase n=1 Tax=Sinorhizobium medicae RepID=UPI0003676375
phosphonoacetate hydrolase
Phosphonoacetate hydrolase {ECO:0000313|EMBL:EHK77909.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;"
scnpilot_cont_500_p_scaffold_1288_16
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17920..18852
DNA (933bp) protein (311aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium meliloti RepID=UPI00037FD1C8
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEG08004.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinor
scnpilot_cont_500_p_scaffold_1288_17
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18849..19088)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Serratia marcescens VGH107 RepID=M3BKR2_SERMA
adenosine deaminase
Adenosine deaminase {ECO:0000313|EMBL:KFF87542.1}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia nematodiphil
scnpilot_cont_500_p_scaffold_1288_18
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19155..19988)
DNA (834bp) protein (278aa)
ABC transporter permease n=1 Tax=Paenibacillus sanguinis RepID=UPI00035E8680
Uncharacterized protein {ECO:0000313|EMBL:KFL32827.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter permease
scnpilot_cont_500_p_scaffold_1288_19
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19985..20788)
DNA (804bp) protein (268aa)
ABC transporter permease n=1 Tax=Paenibacillus sanguinis RepID=UPI00036E2064
Uncharacterized protein {ECO:0000313|EMBL:KFL32826.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter permease
scnpilot_cont_500_p_scaffold_1288_20
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20809..22131)
DNA (1323bp) protein (441aa)
family 1 extracellular solute-binding protein n=1 Tax=Bacillus sp. 10403023 RepID=UPI000287EA0B
Uncharacterized protein {ECO:0000313|EMBL:KKB12671.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_1288_21
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22128..23132)
DNA (1005bp) protein (335aa)
rihB; pyrimidine-specific ribonucleoside hydrolase RihB (EC:3.2.2.8)
inosine-uridine preferring nucleoside hydrolase n=1 Tax=Alkalibacillus haloalkaliphilus RepID=UPI0002D52DC7
Uncharacterized protein {ECO:0000313|EMBL:KFL32824.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
scnpilot_cont_500_p_scaffold_1288_22
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23311..24306
DNA (996bp) protein (332aa)
LysR family transcriptional regulator n=1 Tax=Xanthomonas sacchari RepID=UPI000262B508
Uncharacterized protein {ECO:0000313|EMBL:KKB12670.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
trpI; transcriptional regulator TrpI
scnpilot_cont_500_p_scaffold_1288_23
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24236..25231)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000370A484
AraC type helix-turn-helix
AraC type helix-turn-helix {ECO:0000313|EMBL:CAD84633.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas
scnpilot_cont_500_p_scaffold_1288_24
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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25661..26656
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6F2_POLGS
Conserved protein {ECO:0000313|EMBL:GAK44407.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1288_25
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26669..27298
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6U9L0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB08536.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1288_26
unknown

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27313..27561
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1288_27
unknown

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comp(27710..27967)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1288_28
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(28102..28560)
DNA (459bp) protein (153aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1228055 s
Putative 3-methyladenine DNA glycosylase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UFY8_9RHOB
3-methyladenine DNA glycosylase
Displaying 28 items

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