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scnpilot_cont_500_p_scaffold_1713

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1713_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..841)
DNA (840bp) protein (280aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiace
Pseudouridine synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC09_PELHB rbh
ribosomal large subunit pseudouridine synthase C
scnpilot_cont_500_p_scaffold_1713_2
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(838..1218)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00038196E7
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devos
CrcB protein
scnpilot_cont_500_p_scaffold_1713_3
unknown

Not on your lists

1414..1779
DNA (366bp) protein (122aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1713_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1816..3132)
DNA (1317bp) protein (439aa)
ATPase, AAA family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC10_PELHB rbh
ATPase AAA {ECO:0000313|EMBL:KKB77364.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
ATPase AAA
scnpilot_cont_500_p_scaffold_1713_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3148..4647)
DNA (1500bp) protein (500aa)
Serine protease MucD/AlgY associated with sigma factor RpoE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC11_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:CDP53981.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Serine protease MucD/AlgY associated with sigma factor RpoE
scnpilot_cont_500_p_scaffold_1713_6
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4679..6073
DNA (1395bp) protein (465aa)
Ornithine decarboxylase / arginine decarboxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC12_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC39374.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
ornithine decarboxylase / arginine decarboxylase
scnpilot_cont_500_p_scaffold_1713_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6176..6391
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 PF76_9RHOB">RepID=J5PF76_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10267.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
hypothetical protein
scnpilot_cont_500_p_scaffold_1713_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6485..7024
DNA (540bp) protein (180aa)
Adenylate kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLT3_RHITR
DNA topology modulation protein {ECO:0000313|EMBL:CDP53979.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB0
adenylate kinase
scnpilot_cont_500_p_scaffold_1713_9
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7138..8712
DNA (1575bp) protein (525aa)
ABC transporter n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HPJ0_9RHIZ
ABC transporter {ECO:0000313|EMBL:KKB10547.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
ABC transport system ATP-binding component
scnpilot_cont_500_p_scaffold_1713_10
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8799..9221)
DNA (423bp) protein (141aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REB6_PELHB
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" sou
C4-type zinc finger protein, DksA/TraR family
scnpilot_cont_500_p_scaffold_1713_11
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9334..9717)
DNA (384bp) protein (128aa)
Flagellar trans-acting factor FliX n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REB7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL28764.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
flagellar trans-acting factor FliX
scnpilot_cont_500_p_scaffold_1713_12
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9967..11091
DNA (1125bp) protein (375aa)
Flagellar P-ring protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RER1_PELHB rbh
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteo
flagellar P-ring protein FlgI
scnpilot_cont_500_p_scaffold_1713_13
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11091..11384
DNA (294bp) protein (98aa)
Flagellar protein FlgJ [peptidoglycan hydrolase] {ECO:0000313|EMBL:CDP51941.1}; EC=3.2.1.- {ECO:0000313|EMBL:CDP51941.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RER2_PELHB
hypothetical protein
scnpilot_cont_500_p_scaffold_1713_14
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11440..11904
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RER3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10552.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1713_15
unknown

Not on your lists

12016..12330
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1713_16
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12565..13695
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZC22_METPB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB79365.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
scnpilot_cont_500_p_scaffold_1713_17
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13816..14211
DNA (396bp) protein (132aa)
Flagellum biosynthesis repressor protein FlbT n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CMM9_9RHOB
Flagellar biosynthesis repressor FlbT {ECO:0000313|EMBL:KKB10555.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geo
putative flagellum biosynthesis repressor protein flbT
scnpilot_cont_500_p_scaffold_1713_18
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14192..14569
DNA (378bp) protein (126aa)
Flagellar FlaF n=1 Tax=Rhodovulum sp. PH10 RepID=J9A1M3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB10556.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
flagellar FlaF family protein
scnpilot_cont_500_p_scaffold_1713_19
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14653..16155)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RES0_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB10557.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1713_20
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16168..17895)
DNA (1728bp) protein (576aa)
Flagellar hook-associated protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RES1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10558.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
flagellar hook-associated protein
scnpilot_cont_500_p_scaffold_1713_21
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17925..19691)
DNA (1767bp) protein (589aa)
Flagellar hook-basal body protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGI3_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:KKB78565.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
flagellar hook-basal body protein
scnpilot_cont_500_p_scaffold_1713_22
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19919..20794
DNA (876bp) protein (292aa)
ATPases of the AAA+ class n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RES4_PELHB rbh
ATPases of the AAA+ class {ECO:0000313|EMBL:CDP51932.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ATPase
scnpilot_cont_500_p_scaffold_1713_23
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20832..21743
DNA (912bp) protein (304aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsucc
Homoserine O-succinyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RES5_PELHB rbh
homoserine O-succinyltransferase
scnpilot_cont_500_p_scaffold_1713_24
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21757..22185)
DNA (429bp) protein (143aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XVC6_PEDHD
ATPase {ECO:0000313|EMBL:KIC67193.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
activator of Hsp90 ATPase 1 family protein
scnpilot_cont_500_p_scaffold_1713_25
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22368..23867
DNA (1500bp) protein (500aa)
Amino acid regulated cytosolic protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RES7_PELHB rbh
Amino acid regulated cytosolic protein {ECO:0000313|EMBL:KFL28776.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
amino acid regulated cytosolic protein
scnpilot_cont_500_p_scaffold_1713_26
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23864..24892
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RES8_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC66278.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1713_27
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25549..26124
DNA (576bp) protein (192aa)
Chromate reductase n=1 Tax=Nitratireductor indicus C115 RepID=K2NWB8_9RHIZ
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KKC35526.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidi
chromate reductase
scnpilot_cont_500_p_scaffold_1713_28
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26237..26785)
DNA (549bp) protein (183aa)
UPI0003CEF96D related cluster n=1 Tax=unknown RepID=UPI0003CEF96D
Uncharacterized protein {ECO:0000313|EMBL:ESY53496.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
putative integral membrane protein (DUF2269)
scnpilot_cont_500_p_scaffold_1713_29
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26912..27241)
DNA (330bp) protein (110aa)
Ferredoxin, 2Fe-2S n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RET2_PELHB
Ferredoxin {ECO:0000313|EMBL:KFL28410.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
(2Fe-2S) ferredoxin
scnpilot_cont_500_p_scaffold_1713_30
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27238..28266)
DNA (1029bp) protein (343aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMA
Ferredoxin--NADP reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RET3_PELHB rbh
thioredoxin reductase
Displaying items 1-30 of 34 in total

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