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scnpilot_cont_500_p_scaffold_2143

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2143_1
unknown

Not on your lists

86..391
DNA (306bp) protein (102aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2143_2
unknown

Not on your lists

comp(465..635)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2143_3
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

739..1623
DNA (885bp) protein (295aa)
LysR family transcriptional regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F60089
LysR family transcriptional regulator {ECO:0000313|EMBL:ESY83844.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_2143_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1639..2391)
DNA (753bp) protein (251aa)
23S rRNA (Guanosine-2'-O-)-methyltransferase rlmB {ECO:0000313|EMBL:CDP53919.1}; EC=2.1.1.- {ECO:0000313|EMBL:CDP53919.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
rRNA methylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCU8_PELHB rbh
rRNA methylase
scnpilot_cont_500_p_scaffold_2143_5
unknown

Not on your lists

comp(2748..3041)
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2143_6
Diplodia seriata, Diplodia, Botryosphaeriales, Dothideomycetes, Ascomycota, Fungi

Not on your lists

3055..4083
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Eimeria praecox RepID=U6H6E8_9EIME
Uncharacterized protein {ECO:0000313|EMBL:KKY16632.1}; TaxID=420778 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetes incertae sedis; Botryosphaeriales;
hypothetical protein
scnpilot_cont_500_p_scaffold_2143_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4193..4846)
DNA (654bp) protein (218aa)
Putative membrane protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HT88_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDP53916.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative transmembrane protein
scnpilot_cont_500_p_scaffold_2143_8
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4926..5666
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037DFB96
Uncharacterized protein {ECO:0000313|EMBL:KKB77281.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
prp1; serine/threonine protein phosphatase I
scnpilot_cont_500_p_scaffold_2143_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5941..6717
DNA (777bp) protein (259aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDG2_PELHB rbh
NAD kinase
scnpilot_cont_500_p_scaffold_2143_10
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6743..7954)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDG3_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB82369.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_cont_500_p_scaffold_2143_11
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8038..9177)
DNA (1140bp) protein (380aa)
Flagellar protein FlgJ (Peptidoglycan hydrolase) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDG4_PELHB
Flagellar protein FlgJ (Peptidoglycan hydrolase) {ECO:0000313|EMBL:KFC62702.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source=
flagellar protein FlgJ
scnpilot_cont_500_p_scaffold_2143_12
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9235..9813)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDG5_PELHB
NAD(P)H nitroreductase {ECO:0000313|EMBL:KKC38868.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudin
hypothetical protein
scnpilot_cont_500_p_scaffold_2143_13
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9942..10946
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDG6_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:CDP53905.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2143_14
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11030..12790
DNA (1761bp) protein (587aa)
Putative adenylate cyclase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YFU6_MOBAS rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL32884.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
membrane protein
scnpilot_cont_500_p_scaffold_2143_15
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12897..13151
DNA (255bp) protein (85aa)
Type IV pilus assembly PilZ n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HFW4_9RHIZ
Pilus assembly protein PilZ {ECO:0000313|EMBL:KFL27663.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8
type IV pilus assembly protein PilZ
scnpilot_cont_500_p_scaffold_2143_16
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13222..13572
DNA (351bp) protein (117aa)
Cupin {ECO:0000313|EMBL:KFG71054.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
scnpilot_cont_500_p_scaffold_2143_17
Photorhabdus temperata, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13573..14043)
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Photorhabdus temperata RepID=T0NX90_PHOTE
Uncharacterized protein {ECO:0000313|EMBL:AKH63020.1}; TaxID=230089 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus
acetyltransferase
scnpilot_cont_500_p_scaffold_2143_18
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14040..14747)
DNA (708bp) protein (236aa)
RNA polymerase sigma factor n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PES7_9BURK
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthi
sigma-70 region 2 family protein
Displaying 18 items

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