ggKbase home page

scnpilot_cont_500_p_scaffold_2178

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2178_1
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1361)
DNA (1359bp) protein (453aa)
PAS/PAC sensor-containing diguanylate cyclase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3H7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB77892.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
diguanylate cyclase
scnpilot_cont_500_p_scaffold_2178_2
unknown

Not on your lists

1557..1739
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2178_3
unknown

Not on your lists

1739..2014
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2178_4
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2225..3289)
DNA (1065bp) protein (355aa)
Permease YjgP/YjgQ n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGK2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB83075.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
permease YjgP/YjgQ
scnpilot_cont_500_p_scaffold_2178_5
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3300..4763)
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI00037EABB7
Uncharacterized protein {ECO:0000313|EMBL:EKU99629.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
4-amino-4-deoxy-l-arabinose transferase
scnpilot_cont_500_p_scaffold_2178_6
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4913..5590
DNA (678bp) protein (226aa)
Two component response regulator n=1 Tax=Roseobacter sp. GAI101 RepID=B7RQI3_9RHOB rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:KKB79109.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ins
response regulator protein
scnpilot_cont_500_p_scaffold_2178_7
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5577..7139
DNA (1563bp) protein (521aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thau
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AZA2_9RHOO
signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_2178_8
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7267..7563
DNA (297bp) protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB80211.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
scnpilot_cont_500_p_scaffold_2178_9
unknown

Not on your lists

7866..8405
DNA (540bp) protein (180aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2178_10
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8426..9139)
DNA (714bp) protein (238aa)
Glutathione S-transferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGM7_PELHB
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AEQ51086.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacteriu
scnpilot_cont_500_p_scaffold_2178_11
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9267..9704)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI0003742BC1
Uncharacterized protein {ECO:0000313|EMBL:KKB13486.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2178_12
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9889..10260)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Rhizobium meliloti RepID=M4MHW2_RHIML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG70876.1}; TaxID=1286640 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
scnpilot_cont_500_p_scaffold_2178_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10257..10607)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VXE1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY79957.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
scnpilot_cont_500_p_scaffold_2178_14
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10689..11456
DNA (768bp) protein (256aa)
Putative permease n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGM5_PELHB rbh
Permease {ECO:0000313|EMBL:KKB13509.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
putative permease
scnpilot_cont_500_p_scaffold_2178_15
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11444..13543)
DNA (2100bp) protein (700aa)
Anaerobic dehydrogenase, typically selenocysteine-containing n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGM2_PELHB rbh
Anaerobic dehydrogenase {ECO:0000313|EMBL:CDP52967.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
anaerobic dehydrogenase, typically selenocysteine-containing
scnpilot_cont_500_p_scaffold_2178_16
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13579..13770)
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP52968.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
scnpilot_cont_500_p_scaffold_2178_17
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13960..14274)
DNA (315bp) protein (105aa)
Multidrug transporter n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QME7_RALPI
multidrug transporter
Multidrug transporter {ECO:0000313|EMBL:AGW91293.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DT
scnpilot_cont_500_p_scaffold_2178_18
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14378..14746)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VT05_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU13750.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
scnpilot_cont_500_p_scaffold_2178_19
Morganella morganii, Morganella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14809..15138)
DNA (330bp) protein (110aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=582 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Morga
4-oxalocrotonate tautomerase n=2 Tax=Morganella morganii RepID=J7TPM2_MORMO
4-oxalocrotonate tautomerase
scnpilot_cont_500_p_scaffold_2178_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15188..15610)
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
nucleoside diphosphate kinase n=1 Tax=Kiloniella laminariae RepID=UPI00036B5BEB
nucleoside diphosphate kinase
scnpilot_cont_500_p_scaffold_2178_21
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15725..17608
DNA (1884bp) protein (628aa)
ABC transporter ATP-binding protein uup n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGL1_PELHB rbh
ABC transporter, ATP-binding component {ECO:0000313|EMBL:CDP52977.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
ABC transporter ATP-binding protein uup
scnpilot_cont_500_p_scaffold_2178_22
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17605..18003
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2KQH6_9RHIZ
Cupin {ECO:0000313|EMBL:KKB13496.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein of Cupin superfamily
scnpilot_cont_500_p_scaffold_2178_23
unknown

Not on your lists

comp(18025..18177)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2178_24
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18268..18714)
DNA (447bp) protein (149aa)
DNA polymerase III chi subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGK8_PELHB
DNA polymerase III subunit chi {ECO:0000313|EMBL:KFL30545.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina
DNA polymerase III subunit chi
scnpilot_cont_500_p_scaffold_2178_25
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18711..19760)
DNA (1050bp) protein (350aa)
aminopeptidase A n=1 Tax=Methylosinus sp. LW4 RepID=UPI000372EECF
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1535287 spec
hypothetical protein
Displaying 25 items

View Taxonomy