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scnpilot_cont_500_p_scaffold_2592

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2592_1
unknown

Not on your lists

1..90
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2592_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96..1046
DNA (951bp) protein (317aa)
Putrescine transport system permease protein PotH n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REC6_PELHB rbh
Putrescine transport system permease protein PotH {ECO:0000313|EMBL:CDP53733.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source
putrescine transport system permease protein PotH
scnpilot_cont_500_p_scaffold_2592_3
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1047..1853
DNA (807bp) protein (269aa)
Putrescine transport system permease protein PotI n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REC7_PELHB rbh
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KFL25450.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="D
putrescine transport system permease protein PotI
scnpilot_cont_500_p_scaffold_2592_4
unknown

Not on your lists

comp(1850..2161)
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2592_5
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3191..3964
DNA (774bp) protein (258aa)
GK23094 n=1 Tax=Drosophila willistoni RepID=B4NMF1_DROWI
GK23094 gene product from transcript GK23094-RA
Uncharacterized protein {ECO:0000313|EMBL:KKB85290.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
scnpilot_cont_500_p_scaffold_2592_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3831..4229)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NPR8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF39849.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
hypothetical protein
scnpilot_cont_500_p_scaffold_2592_7
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4342..4683
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G1D2_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK76904.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizob
hypothetical protein
scnpilot_cont_500_p_scaffold_2592_8
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4680..4991
DNA (312bp) protein (104aa)
XRE family transcriptional regulator n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G1D1_RHIML
XRE family transcriptional regulator {ECO:0000313|EMBL:EHK76903.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorh
XRE family transcriptional regulator
scnpilot_cont_500_p_scaffold_2592_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5016..7772)
DNA (2757bp) protein (919aa)
Protein translocase subunit SecA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REF6_PELHB rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
protein export cytoplasm protein SecA ATPase RNA helicase
scnpilot_cont_500_p_scaffold_2592_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7985..8929
DNA (945bp) protein (315aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiac
Foldase protein PrsA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REF7_PELHB
foldase protein PrsA precursor
scnpilot_cont_500_p_scaffold_2592_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8944..9327
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000366E906
DNA polymerase, beta-like region
DNA polymerase, beta-like region {ECO:0000313|EMBL:ABD05085.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops
scnpilot_cont_500_p_scaffold_2592_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9353..9661
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J374_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD05086.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_cont_500_p_scaffold_2592_13
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9774..11006
DNA (1233bp) protein (411aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REG1_PELHB rbh
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" sourc
glutamate N-acetyltransferase / N-acetylglutamate synthase
scnpilot_cont_500_p_scaffold_2592_14
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11008..11751
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003641FCD
Uncharacterized protein {ECO:0000313|EMBL:KKB10940.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2592_15
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12045..12194
DNA (150bp) protein (50aa)
5-methyl-dCTP pyrophosphohydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REG3_PELHB
5-methyl-dCTP pyrophosphohydrolase
5-methyl-dCTP pyrophosphohydrolase {ECO:0000313|EMBL:AEQ52908.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelag
scnpilot_cont_500_p_scaffold_2592_16
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12208..12396
DNA (189bp) protein (63aa)
Fimbriae protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SBY0_9BURK
Flp pilus assembly protein, pilin Flp
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24765.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
scnpilot_cont_500_p_scaffold_2592_17
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12401..13267)
DNA (867bp) protein (289aa)
SAM-dependent methyltransferase, BioC-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REF4_PELHB rbh
SAM-dependent methyltransferase, BioC-like {ECO:0000313|EMBL:CDP51801.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devos
SAM-dependent methyltransferase, BioC-like protein
scnpilot_cont_500_p_scaffold_2592_18
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13302..14075
DNA (774bp) protein (258aa)
Competence protein F-like protein, phosphoribosyltransferase domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REF3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC32098.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
competence protein F-like protein, phosphoribosyltransferase domain protein
scnpilot_cont_500_p_scaffold_2592_19
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14079..14438
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037FB019
Uncharacterized protein {ECO:0000313|EMBL:KKB11519.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2592_20
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14490..14747
DNA (258bp) protein (86aa)
Glutaredoxin 3 (Grx2) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REF2_PELHB
Glutaredoxin {ECO:0000313|EMBL:KFL26158.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
glutaredoxin 3 (Grx2)
scnpilot_cont_500_p_scaffold_2592_21
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14778..15593
DNA (816bp) protein (272aa)
Carbon-nitrogen hydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REF1_PELHB rbh
FIG147869: Carbon-nitrogen hydrolase {ECO:0000313|EMBL:CDP51798.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp.
carbon-nitrogen hydrolase
scnpilot_cont_500_p_scaffold_2592_22
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15615..16040
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REF0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP51797.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2592_23
unknown

Not on your lists

16161..16835
DNA (675bp) protein (225aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2592_24
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16935..17792
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035DE630
Oxidoreductase {ECO:0000313|EMBL:KKC32094.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
putative aldo-keto reductase
scnpilot_cont_500_p_scaffold_2592_25
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17797..18534)
DNA (738bp) protein (246aa)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REE9_PELHB
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiqui
3-demethylubiquinone-9 3-methyltransferase
scnpilot_cont_500_p_scaffold_2592_26
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18659..19939
DNA (1281bp) protein (427aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.
Aspartokinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REE8_PELHB rbh
aspartokinase
scnpilot_cont_500_p_scaffold_2592_27
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20020..22284
DNA (2265bp) protein (755aa)
Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REE7_PELHB rbh
Peptidase {ECO:0000313|EMBL:KFL24884.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated
scnpilot_cont_500_p_scaffold_2592_28
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22414..23487
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REE6_PELHB rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyph
peptide chain release factor 1
scnpilot_cont_500_p_scaffold_2592_29
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23484..24344
DNA (861bp) protein (287aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
Release factor glutamine methyltransferase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNX0_9RHOB
Protein-(glutamine-N5) methyltransferase, release factor-specific
scnpilot_cont_500_p_scaffold_2592_30
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24662..24898
DNA (237bp) protein (79aa)
Ribonuclease E {ECO:0000313|EMBL:CDP51454.1}; EC=3.1.26.12 {ECO:0000313|EMBL:CDP51454.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ENR7_METSB
hypothetical protein
Displaying 30 items

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