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scnpilot_cont_500_p_scaffold_259

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_259_1
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1214)
DNA (1212bp) protein (404aa)
Putative ABC-type Fe3+ transport system, permease component n=1 Tax=Vibrio nigripulchritudo RepID=U4KIX8_9VIBR rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB86389.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
putative ABC-type Fe3+ transport system, permease component
scnpilot_cont_500_p_scaffold_259_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1211..2248)
DNA (1038bp) protein (346aa)
Polyamine ABC transporter, ATP-binding protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=D4S4F7_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB08873.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ABC transporter ATP-binding protein
scnpilot_cont_500_p_scaffold_259_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2371..3360
DNA (990bp) protein (330aa)
ABC transporter, substrate binding protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UBQ4_RHIRD
Ferric iron ABC transporter, iron-binding protein {ECO:0000313|EMBL:CDP52052.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source
ABC transporter substrate binding protein
scnpilot_cont_500_p_scaffold_259_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3464..4480
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000360B1C8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB86387.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_cont_500_p_scaffold_259_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4477..5289
DNA (813bp) protein (271aa)
UPI0003D1AC51 related cluster n=1 Tax=unknown RepID=UPI0003D1AC51
Glycerol-3-phosphate regulon repressor GlpR {ECO:0000313|EMBL:CDP52054.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devo
DeoR faimly transcriptional regulator
scnpilot_cont_500_p_scaffold_259_6
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5359..7119
DNA (1761bp) protein (587aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucan
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1M7_STAND rbh
malto-oligosyltrehalose trehalohydrolase
scnpilot_cont_500_p_scaffold_259_7
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7186..7680)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HM05_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKC32833.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_259_8
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7825..8865
DNA (1041bp) protein (347aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU00
pyrC2; dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CS24_9RHOB rbh
scnpilot_cont_500_p_scaffold_259_9
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8952..10004
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI0003688A40 rbh
Oxidoreductase {ECO:0000313|EMBL:KKB11616.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
theronine dehydrogenase-like Zn-dependent dehydrogenase
scnpilot_cont_500_p_scaffold_259_10
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10001..10975
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000367CC69 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB11594.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
dehydrogenase
scnpilot_cont_500_p_scaffold_259_11
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11056..12195)
DNA (1140bp) protein (380aa)
UPI0003CF113B related cluster n=1 Tax=unknown RepID=UPI0003CF113B rbh
Uncharacterized protein {ECO:0000313|EMBL:ESW87519.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_259_12
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12212..12886)
DNA (675bp) protein (225aa)
Lysophospholipase L1-like esterase n=1 Tax=Rhizobium sp. CF080 RepID=J2QX66_9RHIZ
Lysophospholipase L1-like esterase
Uncharacterized protein {ECO:0000313|EMBL:KKB11597.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
scnpilot_cont_500_p_scaffold_259_13
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12883..14151)
DNA (1269bp) protein (423aa)
UPI0003CF0D48 related cluster n=1 Tax=unknown RepID=UPI0003CF0D48
Uncharacterized protein {ECO:0000313|EMBL:KKB11598.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_259_14
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14148..15188)
DNA (1041bp) protein (347aa)
UPI0003CE6F79 related cluster n=1 Tax=unknown RepID=UPI0003CE6F79 rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB11599.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
SN-glycerol-3-phosphate transport ATP-binding protein UgpC
scnpilot_cont_500_p_scaffold_259_15
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15273..16121)
DNA (849bp) protein (283aa)
sugar ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI00037F07AB rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KKB11600.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.
maltose ABC transporter permease
scnpilot_cont_500_p_scaffold_259_16
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16118..16963)
DNA (846bp) protein (282aa)
Sugar ABC transporter, permease protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBM5_PELHB rbh
ABC transporter permease {ECO:0000313|EMBL:KKB11601.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
sugar ABC transporter permease
scnpilot_cont_500_p_scaffold_259_17
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17030..18301)
DNA (1272bp) protein (424aa)
Sugar-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBM4_PELHB rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB11602.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
sugar-binding protein
scnpilot_cont_500_p_scaffold_259_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18326..19369)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FUD8_9RHIZ rbh
Hth-type transcriptional regulator {ECO:0000313|EMBL:KKB08915.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinha
putative hth-type transcriptional regulator
scnpilot_cont_500_p_scaffold_259_19
unknown

Not on your lists

19608..19751
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_259_20
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19697..20272)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HTT2_PSEUO
HhH-GPD domain protein {ECO:0000313|EMBL:ETM67127.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (str
hypothetical protein
scnpilot_cont_500_p_scaffold_259_21
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20286..20495)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B977_PARDP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL72071.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrif
scnpilot_cont_500_p_scaffold_259_22
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20531..21796)
DNA (1266bp) protein (422aa)
L-seryl-tRNA selenium transferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN97_9RHIZ
L-seryl-tRNA selenium transferase {ECO:0000313|EMBL:EHK57785.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
pyridoxal phosphate-dependent enzyme
scnpilot_cont_500_p_scaffold_259_23
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21813..22616
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035DF939
IclR family transcriptional regulator {ECO:0000313|EMBL:KJF66995.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
IclR family transcriptional regulator
scnpilot_cont_500_p_scaffold_259_24
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22810..23310)
DNA (501bp) protein (167aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2V8_9RHIZ
Endoribonuclease L-PSP {ECO:0000313|EMBL:KFG67870.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;
translation initiation inhibitor protein
scnpilot_cont_500_p_scaffold_259_25
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23311..24267)
DNA (957bp) protein (319aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2V9_9RHIZ rbh
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EIM30551.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microv
oligopeptide ABC transporter ATPase
scnpilot_cont_500_p_scaffold_259_26
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24264..25322)
DNA (1059bp) protein (353aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D81890 rbh
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EIM30552.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microv
oligopeptide transport ATP-binding protein OppD
scnpilot_cont_500_p_scaffold_259_27
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25319..26449)
DNA (1131bp) protein (377aa)
Dihydroorotase {ECO:0000313|EMBL:EBA06897.1}; EC=3.5.2.3 {ECO:0000313|EMBL:EBA06897.1};; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittu
dihydroorotase n=1 Tax=Martelella mediterranea RepID=UPI0003669970 rbh
dihydroorotase
scnpilot_cont_500_p_scaffold_259_28
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26451..27245)
DNA (795bp) protein (265aa)
Binding-protein-dependent transport system inner membrane component family protein 10 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T2T5_ALCXX
Binding-protein-dependent transport system inner membrane component family protein 10 {ECO:0000313|EMBL:EGP45469.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
peptide ABC transporter permease
scnpilot_cont_500_p_scaffold_259_29
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27415..29541)
DNA (2127bp) protein (709aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KFL26776.1}; EC=5.4.99.2 {ECO:0000313|EMBL:KFL26776.1};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae
Methylmalonyl-CoA mutase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Q9_PELHB rbh
methylmalonyl-CoA mutase
scnpilot_cont_500_p_scaffold_259_30
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29695..31701)
DNA (2007bp) protein (669aa)
Propionyl-CoA carboxylase biotin-containing subuni t {ECO:0000313|EMBL:CDP50243.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CDP50243.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
Propionyl-CoA carboxylase biotin-containing subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6R0_PELHB rbh
propionyl-CoA carboxylase biotin-containing subunit
Displaying items 1-30 of 72 in total

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