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scnpilot_cont_500_p_scaffold_292

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_292_1
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1206
DNA (1206bp) protein (402aa)
Leucine aminopeptidase 2, chloroplastic {ECO:0000256|SAAS:SAAS00070899}; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00279693};; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00070892};; Leucine aminopeptidase 3, chloropla
Peptidase B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS9_PELHB rbh
peptidase B
scnpilot_cont_500_p_scaffold_292_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1744..2058
DNA (315bp) protein (105aa)
MarR family transcriptional regulator n=2 Tax=Sphingomonas melonis RepID=UPI000367F15B
Uncharacterized protein {ECO:0000313|EMBL:KKB77038.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
MarR family transcriptional regulator with acetyltransferase activity
scnpilot_cont_500_p_scaffold_292_3
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2082..3020)
DNA (939bp) protein (313aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFT0_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL25781.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
D-3-phosphoglycerate dehydrogenase
scnpilot_cont_500_p_scaffold_292_4
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3090..3956)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003781141
Uncharacterized protein {ECO:0000313|EMBL:KFL25780.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
membrane c-type cytochrome cy
scnpilot_cont_500_p_scaffold_292_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4197..5024
DNA (828bp) protein (276aa)
Prephenate dehydratase {ECO:0000313|EMBL:KFL25779.1}; EC=4.2.1.51 {ECO:0000313|EMBL:KFL25779.1};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
Prephenate dehydratase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFT2_PELHB rbh
prephenate dehydratase
scnpilot_cont_500_p_scaffold_292_6
unknown

Not on your lists

comp(5092..5433)
DNA (342bp) protein (114aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_292_7
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5751..6023)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N6T6_AFIFE
PilZ domain protein {ECO:0000313|EMBL:KFC67303.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_292_8
unknown

Not on your lists

comp(6131..6499)
DNA (369bp) protein (123aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_292_9
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6731..7168)
DNA (438bp) protein (146aa)
Pseudoazurin n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D9_9BRAD
Pseudoazurin {ECO:0000313|EMBL:CDX16324.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Pseudoazurin
scnpilot_cont_500_p_scaffold_292_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7153..7686)
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP52330.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
scnpilot_cont_500_p_scaffold_292_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(7747..9804)
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Sutterella wadsworthensis HGA0223 RepID=S3BGX2_9BURK rbh
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
scnpilot_cont_500_p_scaffold_292_12
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10065..10550
DNA (486bp) protein (162aa)
MarR family transcriptional regulator n=1 Tax=Nevskia ramosa RepID=UPI0003B33B23
Putative MarR family transcriptional regulator {ECO:0000313|EMBL:GAJ96995.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium g
transcriptional regulator, MarR family
scnpilot_cont_500_p_scaffold_292_13
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10612..12414
DNA (1803bp) protein (601aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:KFL25633.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KFL25633.1};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; H
DNA polymerase III subunits gamma and tau n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFT3_PELHB rbh
DNA polymerase III subunits gamma and tau
scnpilot_cont_500_p_scaffold_292_14
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12414..12737
DNA (324bp) protein (108aa)
Nucleoid-associated protein Avi_0111 n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JY30_AGRVS
Nucleoid-associated protein VW29_18970 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devos
hypothetical protein
scnpilot_cont_500_p_scaffold_292_15
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12855..13445
DNA (591bp) protein (197aa)
Recombination protein RecR n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFT5_PELHB rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosi
recombination protein RecR
scnpilot_cont_500_p_scaffold_292_16
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13470..13958)
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC33361.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
scnpilot_cont_500_p_scaffold_292_17
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14045..15223)
DNA (1179bp) protein (393aa)
DNA recombination protein RmuC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGC5_PELHB rbh
DNA recombination protein RmuC {ECO:0000313|EMBL:CDP53341.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB00
DNA recombination protein RmuC
scnpilot_cont_500_p_scaffold_292_18
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15349..15870
DNA (522bp) protein (174aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGC6_PELHB
peptide deformylase
scnpilot_cont_500_p_scaffold_292_19
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16020..16940
DNA (921bp) protein (307aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1502724 species="
Methionyl-tRNA formyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGC7_PELHB rbh
methionyl-tRNA formyltransferase
scnpilot_cont_500_p_scaffold_292_20
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17095..17832
DNA (738bp) protein (246aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGC8_PELHB rbh
tRNA pseudouridine synthase A
scnpilot_cont_500_p_scaffold_292_21
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17843..18424)
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP53337.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_292_22
unknown

Not on your lists

comp(18439..18978)
DNA (540bp) protein (180aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_292_23
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18975..20135)
DNA (1161bp) protein (387aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rul
Succinyl-diaminopimelate desuccinylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGD2_PELHB rbh
N-succinyl-L,L-diaminopimelate desuccinylase
scnpilot_cont_500_p_scaffold_292_24
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20167..20709)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBZ3_9RHOB
integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KFL24816.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
scnpilot_cont_500_p_scaffold_292_25
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20843..21244)
DNA (402bp) protein (134aa)
Putative membrane protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KD76_MESAW
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13019.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
scnpilot_cont_500_p_scaffold_292_26
unknown

Not on your lists

comp(21355..21840)
DNA (486bp) protein (162aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_292_27
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21895..22737)
DNA (843bp) protein (281aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAA
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGD3_PELHB
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
scnpilot_cont_500_p_scaffold_292_28
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22872..23729
DNA (858bp) protein (286aa)
Decarboxylase family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGD4_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB77051.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
decarboxylase
scnpilot_cont_500_p_scaffold_292_29
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23778..24479)
DNA (702bp) protein (234aa)
Phosphoglycolate phosphatase-like protein, clustered with acetylglutamate kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGD6_PELHB
HAD family hydrolase {ECO:0000313|EMBL:KKB75914.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
phosphoglycolate phosphatase-like protein, clustered with acetylglutamate kinase
scnpilot_cont_500_p_scaffold_292_30
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24540..24848)
DNA (309bp) protein (103aa)
UPI0003CFB0A7 related cluster n=1 Tax=unknown RepID=UPI0003CFB0A7
Uncharacterized protein {ECO:0000313|EMBL:ESZ23634.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
Displaying items 1-30 of 58 in total

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