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scnpilot_cont_500_p_scaffold_409

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_409_1
unknown

Not on your lists

1..246
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_409_2
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(462..1910)
DNA (1449bp) protein (483aa)
uxuB; mannitol dehydrogenase (EC:1.1.1.57)
D-mannonate oxidoreductase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YDQ1_MOBAS rbh
Dioxygenase {ECO:0000313|EMBL:KKB13091.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
scnpilot_cont_500_p_scaffold_409_3
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1907..3307)
DNA (1401bp) protein (467aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HA
glucuronate isomerase (EC:5.3.1.12)
glucuronate isomerase n=1 Tax=Rhizobium meliloti RepID=UPI0002D561D9
scnpilot_cont_500_p_scaffold_409_4
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3565..4962)
DNA (1398bp) protein (466aa)
Amidohydrolase, AtzE family n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UCD0_METS4 rbh
amidase
Amidohydrolase, AtzE family {ECO:0000313|EMBL:ACB22664.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;"
scnpilot_cont_500_p_scaffold_409_5
unknown

Not on your lists

comp(4959..5147)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_409_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5516..8188
DNA (2673bp) protein (891aa)
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPK1_9RHIZ rbh
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EHK57344.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacter
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
scnpilot_cont_500_p_scaffold_409_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8248..9369)
DNA (1122bp) protein (374aa)
lysine--tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PLL7_RHOS1 rbh
Translation elongation factor P Lys34:lysine trans ferase {ECO:0000313|EMBL:CDP49983.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;
scnpilot_cont_500_p_scaffold_409_8
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9387..9956
DNA (570bp) protein (190aa)
Elongation factor P n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWV7_9RHOB
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiace
translation elongation factor P
scnpilot_cont_500_p_scaffold_409_9
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10376..11281
DNA (906bp) protein (302aa)
Signal protein PDZ n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FLL1_9RHIZ
Signal protein PDZ {ECO:0000313|EMBL:ESX81011.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC
PDZ/DHR/GLGF domain-containing protein
scnpilot_cont_500_p_scaffold_409_10
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11801..12310)
DNA (510bp) protein (170aa)
Twin-arginine translocation pathway signal and cupin region containing protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XWM1_9PROT
Twin-arginine translocation pathway signal and cupin region containing protein {ECO:0000313|EMBL:EGY02345.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rh
Cupin domain protein
scnpilot_cont_500_p_scaffold_409_11
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12450..14927
DNA (2478bp) protein (826aa)
ATP-dependent helicase HrpB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8M9_PELHB rbh
ATP-dependent helicase {ECO:0000313|EMBL:KKC41037.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudin
ATP-dependent helicase HrpB
scnpilot_cont_500_p_scaffold_409_12
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14954..15379
DNA (426bp) protein (142aa)
Methylmalonyl-CoA epimerase n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28MI1_JANSC
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:KKC33308.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.
methylmalonyl-CoA epimerase
scnpilot_cont_500_p_scaffold_409_13
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15493..16563
DNA (1071bp) protein (357aa)
RecD-like DNA helicase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Q6_PELHB rbh
ATP-binding protein {ECO:0000313|EMBL:KKB78273.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
recombinase D
scnpilot_cont_500_p_scaffold_409_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16578..18140)
DNA (1563bp) protein (521aa)
Signal transduction histidine kinase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZJ0_9RHIZ
Signal transduction histidine kinase {ECO:0000313|EMBL:EHK53858.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
Signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_409_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18153..18521)
DNA (369bp) protein (123aa)
Response regulator receiver domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I2Z5_9RHIZ
Response regulator receiver domain-containing protein {ECO:0000313|EMBL:EHK52633.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobiu
Two component sensor kinase/response regulator hybrid protein
scnpilot_cont_500_p_scaffold_409_16
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18778..18996
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=3 Tax=Rhizobium fredii RepID=C3MFX5_RHISN
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia l
infA; translation initiation factor IF-1
scnpilot_cont_500_p_scaffold_409_17
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19098..20144
DNA (1047bp) protein (349aa)
aldo/keto reductase n=1 Tax=Burkholderia kururiensis RepID=UPI0003455F5C
Aldo/keto reductase {ECO:0000313|EMBL:KKB11079.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
mocA; oxidoreductase
scnpilot_cont_500_p_scaffold_409_18
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20251..20712
DNA (462bp) protein (154aa)
Iron-responsive transcriptional regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PDM9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB86772.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
rirA; iron-responsive transcriptional regulator
scnpilot_cont_500_p_scaffold_409_19
Pseudomonas moraviensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20788..22440
DNA (1653bp) protein (551aa)
Membrane protein n=1 Tax=Pseudomonas moraviensis R28 RepID=V8R9S1_9PSED rbh
Membrane protein {ECO:0000313|EMBL:ETF08652.1}; TaxID=1395516 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas moraviensis
membrane protein
scnpilot_cont_500_p_scaffold_409_20
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22495..24303
DNA (1809bp) protein (603aa)
ABC transporter, ATP-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG57_PELHB rbh
Elongation factor 3 {ECO:0000313|EMBL:KFL27607.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
ABC transporter ATP-binding protein
scnpilot_cont_500_p_scaffold_409_21
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24318..25358)
DNA (1041bp) protein (347aa)
HTH-type transcriptional regulator AglR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5M4_9RHIZ rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CDP53407.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
putative transcriptional regulator, LacI family
scnpilot_cont_500_p_scaffold_409_22
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25879..26094
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBV6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFC64391.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_409_23
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26122..27261)
DNA (1140bp) protein (380aa)
LacI family transcription regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7D0_9RHIZ
LacI family transcriptional regulator {ECO:0000313|EMBL:KKC34885.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psy
LacI family transcriptional regulator
scnpilot_cont_500_p_scaffold_409_24
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27673..28620
DNA (948bp) protein (316aa)
Sugar (D-ribose) ABC transporter periplasmic sugar-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7C9_9RHIZ
Sugar (D-ribose) ABC transporter, periplasmic sugar-binding protein {ECO:0000313|EMBL:CDX53517.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
ribose ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_409_25
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28727..30079
DNA (1353bp) protein (451aa)
ABC transporter related protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCF8_MESCW
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADV09684.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob
scnpilot_cont_500_p_scaffold_409_26
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30076..31080
DNA (1005bp) protein (335aa)
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporters n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFB5_MESAW
permease component of ribose/xylose/arabinose/galactoside ABC-type transporters
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporters {ECO:0000313|EMBL:AGB43074.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; R
scnpilot_cont_500_p_scaffold_409_27
Aureobasidium subglaciale, Aureobasidium, Dothideales, Dothideomycetidae, Ascomycota, Fungi

Not on your lists

comp(31136..31501)
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) RepID=A5DRK5_PICGU
Uncharacterized protein {ECO:0000313|EMBL:KEQ92258.1}; TaxID=1043005 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Dothideales; Aureobasidiaceae;
Extracellular transglycosylase, with LysM peptidoglycan binding domain
scnpilot_cont_500_p_scaffold_409_28
unknown

Not on your lists

comp(31596..31826)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_409_29
unknown

Not on your lists

comp(31819..31968)
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_409_30
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32029..32577)
DNA (549bp) protein (183aa)
Ribose 1,5-bisphosphate phosphokinase PhnN {ECO:0000256|HAMAP-Rule:MF_00836}; EC=2.7.4.23 {ECO:0000256|HAMAP-Rule:MF_00836};; Ribose 1,5-bisphosphokinase {ECO:0000256|HAMAP-Rule:MF_00836}; TaxID=44361
putative ribose 1,5-bisphosphokinase (EC:2.7.4.8)
Putative ribose 1,5-bisphosphokinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EX78_9PROT
Displaying items 1-30 of 69 in total

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