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scnpilot_cont_500_p_scaffold_469

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_469_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..684)
DNA (684bp) protein (228aa)
serine protease n=1 Tax=alpha proteobacterium SCGC AAA076-C03 RepID=UPI00037D6808
Uncharacterized protein {ECO:0000313|EMBL:KFL27485.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
serine protease DO-like protein
scnpilot_cont_500_p_scaffold_469_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(841..1995)
DNA (1155bp) protein (385aa)
HflC protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFC2_PELHB rbh
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
HflC protein
scnpilot_cont_500_p_scaffold_469_3
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1999..3120)
DNA (1122bp) protein (374aa)
HflK protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFC3_PELHB rbh
Tail fiber protein {ECO:0000313|EMBL:KFL27483.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
HflK protein
scnpilot_cont_500_p_scaffold_469_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3260..3628)
DNA (369bp) protein (123aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiace
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=uncultured bacterium RepID=E4WMG1_9BACT
scnpilot_cont_500_p_scaffold_469_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3625..4104)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037558EC
Histone acetyltransferase HPA2 and related acetylt ransferases {ECO:0000313|EMBL:CDP52367.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devo
histone acetyltransferase HPA2-related acetyltransferase
scnpilot_cont_500_p_scaffold_469_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4101..4421)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGA8_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:KFL28967.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_469_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4427..5443)
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=E4WMG5_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDP52365.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_469_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5440..6282)
DNA (843bp) protein (281aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
Thymidylate synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFD0_PELHB rbh
thymidylate synthase
scnpilot_cont_500_p_scaffold_469_9
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6379..6777)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQR6_THISH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL74290.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
scnpilot_cont_500_p_scaffold_469_10
unknown

Not on your lists

comp(6778..7029)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_469_11
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7509..8006
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFD4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL27462.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_469_12
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8012..8227
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFD5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP52548.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_469_13
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8210..11899)
DNA (3690bp) protein (1230aa)
Uncharacterized protein involved in outer membrane biogenesis-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFD6_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL27460.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_469_14
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11964..14282
DNA (2319bp) protein (773aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosi
ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFE2_PELHB rbh
ATP-dependent DNA helicase UvrD
scnpilot_cont_500_p_scaffold_469_15
unknown

Not on your lists

14289..14717
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_469_16
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14733..15674)
DNA (942bp) protein (314aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HL40_9RHIZ rbh
Membrane protein {ECO:0000313|EMBL:KKB11430.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Membrane protein
scnpilot_cont_500_p_scaffold_469_17
unknown

Not on your lists

comp(15744..15899)
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_469_18
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15896..17089)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GEQ3_DESGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW14644.1}; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovi
scnpilot_cont_500_p_scaffold_469_19
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17086..18075)
DNA (990bp) protein (330aa)
glucosyl transferase n=1 Tax=Sphingomonas melonis RepID=UPI0003798867
Glycosyl transferase family protein {ECO:0000313|EMBL:KDA00641.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomo
glycosyltransferase
scnpilot_cont_500_p_scaffold_469_20
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18317..18985
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG56_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC35285.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
hypothetical protein
scnpilot_cont_500_p_scaffold_469_21
unknown

Not on your lists

comp(18987..19316)
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_469_22
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19449..19712
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB13304.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
scnpilot_cont_500_p_scaffold_469_23
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19696..19938
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB13303.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
scnpilot_cont_500_p_scaffold_469_24
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20003..20671)
DNA (669bp) protein (223aa)
cell envelope biogenesis protein OmpA n=1 Tax=Rhizobium mongolense RepID=UPI0003B35227
Cell envelope biogenesis protein OmpA {ECO:0000313|EMBL:KKB76679.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sol
OmpA/MotB family outer membrane protein
scnpilot_cont_500_p_scaffold_469_25
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20760..21530)
DNA (771bp) protein (257aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLM5_9RHIZ rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KFL28067.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
3-oxoacyl-ACP reductase
scnpilot_cont_500_p_scaffold_469_26
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21708..23033)
DNA (1326bp) protein (442aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL30941.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
scnpilot_cont_500_p_scaffold_469_27
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23454..24734
DNA (1281bp) protein (427aa)
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:000025
5-aminolevulinate synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9L3_PELHB rbh
5-aminolevulinate synthase
scnpilot_cont_500_p_scaffold_469_28
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24731..25417)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L9A2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ29619.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
scnpilot_cont_500_p_scaffold_469_29
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25585..26220)
DNA (636bp) protein (212aa)
Two component transcriptional regulator, LuxR family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9L1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC35280.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
LuxR family transcriptional regulator
scnpilot_cont_500_p_scaffold_469_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26565..26888)
DNA (324bp) protein (108aa)
Histone H1-like nucleoprotein HC2 n=1 Tax=Variovorax sp. CF313 RepID=J3CRC0_9BURK
Histone H1-like nucleoprotein HC2 {ECO:0000313|EMBL:EJL76959.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
signal recognition particle receptor FtsY
Displaying items 1-30 of 42 in total

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