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scnpilot_cont_500_p_scaffold_529

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_529_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..518)
DNA (516bp) protein (172aa)
Aquaporin Z n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YP19_9SPHN
Porin {ECO:0000313|EMBL:KIZ42095.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
porin
scnpilot_cont_500_p_scaffold_529_2
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(598..1449)
DNA (852bp) protein (284aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9B4_PELHB
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:KFC68744.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Dev
glycosyl transferase family protein
scnpilot_cont_500_p_scaffold_529_3
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1555..1974
DNA (420bp) protein (140aa)
Small heat shock protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9B3_PELHB
Heat-shock protein Hsp20 {ECO:0000313|EMBL:KFL26306.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
small heat shock protein
scnpilot_cont_500_p_scaffold_529_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1988..2272
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP53435.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
scnpilot_cont_500_p_scaffold_529_5
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2339..2812)
DNA (474bp) protein (158aa)
PTS system nitrogen-specific IIA component, PtsN n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9A9_PELHB
PTS system nitrogen-specific IIA component, PtsN {ECO:0000313|EMBL:KFC68741.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source=
PTS system nitrogen-specific IIA component, PtsN
scnpilot_cont_500_p_scaffold_529_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2900..3466)
DNA (567bp) protein (189aa)
Ribosomal subunit interface protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9A8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30380.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ribosomal subunit interface protein
scnpilot_cont_500_p_scaffold_529_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3652..5139)
DNA (1488bp) protein (496aa)
RNA polymerase sigma-54 factor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8L4_PELHB rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB
RNA polymerase sigma-54 factor RpoN
scnpilot_cont_500_p_scaffold_529_8
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5336..6091)
DNA (756bp) protein (252aa)
Lipopolysaccharide ABC transporter, ATP-binding protein LptB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8L5_PELHB rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB11512.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geoje
lipopolysaccharide ABC transporter ATP-binding protein LptB
scnpilot_cont_500_p_scaffold_529_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6088..6564)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8L6_PELHB
Protein-glutamate methylesterase family protein {ECO:0000313|EMBL:CDP53440.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="
hypothetical protein
scnpilot_cont_500_p_scaffold_529_10
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6561..7253)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LK02_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB76118.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_cont_500_p_scaffold_529_11
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7253..7867)
DNA (615bp) protein (205aa)
Ribonuclease D related protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8L8_PELHB rbh
3'-5' exonuclease {ECO:0000313|EMBL:KFL26314.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
ribonuclease D related protein
scnpilot_cont_500_p_scaffold_529_12
unknown

Not on your lists

8183..8341
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_529_13
unknown

Not on your lists

8607..8816
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_529_14
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9609..10568
DNA (960bp) protein (320aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R992_PELHB rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CDP53448.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp.
NAD-dependent epimerase/dehydratase
scnpilot_cont_500_p_scaffold_529_15
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10597..11730)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WYK7_RHOS5
Uncharacterized protein {ECO:0000313|EMBL:KFL28004.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_529_16
Dokdonia donghaensis, Dokdonia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12245..13249
DNA (1005bp) protein (335aa)
Curlin associated repeat-containing protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C6C3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO05430.1}; TaxID=1300343 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Dokdonia.;" source="Dokdonia donghaensis DSW
curlin associated repeat-containing protein
scnpilot_cont_500_p_scaffold_529_17
unknown

Not on your lists

comp(13339..14700)
DNA (1362bp) protein (454aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_529_18
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14915..15727)
DNA (813bp) protein (271aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
bacA1; Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XQV9_RHIRD
scnpilot_cont_500_p_scaffold_529_19
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15813..16490
DNA (678bp) protein (226aa)
Glutathione S-transferase family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R993_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC34430.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
glutathione S-transferase family protein
scnpilot_cont_500_p_scaffold_529_20
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16527..16835
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BX65_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM74167.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
brnT; BrnT-related ribonuclease toxin
scnpilot_cont_500_p_scaffold_529_21
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16804..17064
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7L3E9_METC4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK86357.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
scnpilot_cont_500_p_scaffold_529_22
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17051..18184
DNA (1134bp) protein (378aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=443610 species
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00031E9626 rbh
iron-sulfur cluster binding protein
scnpilot_cont_500_p_scaffold_529_23
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18184..19056
DNA (873bp) protein (291aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R995_PELHB rbh
Epimerase {ECO:0000313|EMBL:KKB76401.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
nucleoside-diphosphate-sugar epimerase
scnpilot_cont_500_p_scaffold_529_24
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19053..19727
DNA (675bp) protein (225aa)
Acetyltransferase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J838_AGRRK
acetyltransferase
Acetyltransferase protein {ECO:0000313|EMBL:ACM27359.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; A
scnpilot_cont_500_p_scaffold_529_25
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19724..20755
DNA (1032bp) protein (344aa)
Aldo/keto reductase n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P9R0_9CAUL
Aldo/keto reductase {ECO:0000313|EMBL:KFL24871.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
aldo/keto reductase
scnpilot_cont_500_p_scaffold_529_26
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20742..21950)
DNA (1209bp) protein (403aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL30513.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
scnpilot_cont_500_p_scaffold_529_27
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21947..23158)
DNA (1212bp) protein (404aa)
ligase n=1 Tax=Psychromonas hadalis RepID=UPI0003B77FCD
Uncharacterized protein {ECO:0000313|EMBL:KKC34019.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
scnpilot_cont_500_p_scaffold_529_28
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23155..24291)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ3_PELHB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ53694.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
scnpilot_cont_500_p_scaffold_529_29
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24288..26696)
DNA (2409bp) protein (803aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ4_PELHB rbh
phenylalanyl-tRNA synthetase beta chain
scnpilot_cont_500_p_scaffold_529_30
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26693..27325)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JAA9_FRASU
Glycerol-3-phosphate ABC transporter, permease pro tein UgpE {ECO:0000313|EMBL:CDP50532.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosi
hypothetical protein
Displaying items 1-30 of 42 in total

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