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scnpilot_cont_500_p_scaffold_671

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_671_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..692)
DNA (690bp) protein (230aa)
Protein containing transglutaminase-like domain, putative cysteine protease n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA97_PELHB
Transglutaminase-like domain protein {ECO:0000313|EMBL:KFC68410.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp.
protein containing transglutaminase-like domain cysteine protease
scnpilot_cont_500_p_scaffold_671_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(692..1636)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA98_PELHB rbh
A alpha-helical domain with a conserved ER moti {ECO:0000313|EMBL:KKB85998.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="
hypothetical protein
scnpilot_cont_500_p_scaffold_671_3
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1637..3058)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA99_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB85999.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_cont_500_p_scaffold_671_4
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3143..5437)
DNA (2295bp) protein (765aa)
Glucan 1,4-alpha-glucosidase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BEB0_MEISD rbh
Glucan 1,4-alpha-glucosidase {ECO:0000313|EMBL:KKB76014.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
glucan 1,4-alpha-glucosidase
scnpilot_cont_500_p_scaffold_671_5
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5427..6212)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00037CCC35 rbh
Glucose 1-dehydrogenase {ECO:0000313|EMBL:EJU13389.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
glucose dehydrogenase rbh
scnpilot_cont_500_p_scaffold_671_6
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6362..7291
DNA (930bp) protein (310aa)
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Rhizobium sp. CF080 RepID=J3AT82_9RHIZ rbh
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KFC68407.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. L
glycerate dehydrogenase (GyaR-like protein)
scnpilot_cont_500_p_scaffold_671_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7310..8599)
DNA (1290bp) protein (430aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9M6_PELHB rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
scnpilot_cont_500_p_scaffold_671_8
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9316..9915)
DNA (600bp) protein (200aa)
Terminase small subunit n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZFR5_GLUDA
terminase small subunit
Terminase small subunit {ECO:0000313|EMBL:ACI52217.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconaceto
scnpilot_cont_500_p_scaffold_671_9
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10065..11720)
DNA (1656bp) protein (552aa)
Putative ATPase n=1 Tax=Rhizobium sp. CF142 RepID=J1T0B6_9RHIZ rbh
putative phage helicase
Putative ATPase {ECO:0000313|EMBL:EJJ25021.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhiz
scnpilot_cont_500_p_scaffold_671_10
unknown

Not on your lists

comp(11780..12175)
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_671_11
unknown

Not on your lists

comp(12888..13145)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_671_12
unknown

Not on your lists

13230..13472
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_671_13
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13469..13810)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JGR4_BURVG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO55467.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
scnpilot_cont_500_p_scaffold_671_14
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13836..15476)
DNA (1641bp) protein (547aa)
Uncharacterized protein {ECO:0000313|EMBL:KEP71516.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianens
Putative uncharacterized protein id=4525731 bin=GWC2_TM7_48_9 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
hypothetical protein
scnpilot_cont_500_p_scaffold_671_15
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15486..19694)
DNA (4209bp) protein (1403aa)
UPI0003CE1A8F related cluster n=1 Tax=unknown RepID=UPI0003CE1A8F rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY02740.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_671_16
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19691..22033)
DNA (2343bp) protein (781aa)
UPI0003CE17DA related cluster n=1 Tax=unknown RepID=UPI0003CE17DA
Uncharacterized protein {ECO:0000313|EMBL:ESY02741.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_671_17
unknown

Not on your lists

comp(22033..22374)
DNA (342bp) protein (114aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_671_18
unknown

Not on your lists

comp(22371..23141)
DNA (771bp) protein (257aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_671_19
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23141..23344)
DNA (204bp) protein (68aa)
DNA-binding protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B42700
DNA-binding protein {ECO:0000313|EMBL:KFI27654.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massil
hypothetical protein
scnpilot_cont_500_p_scaffold_671_20
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23441..24643)
DNA (1203bp) protein (401aa)
CP4-like integrase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BR4_RHILO rbh
CP4-like integrase
CP4-like integrase {ECO:0000313|EMBL:BAB51908.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain
scnpilot_cont_500_p_scaffold_671_21
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24891..25592)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CNC9_9RHIZ
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN54595.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" sourc
scnpilot_cont_500_p_scaffold_671_22
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25589..26581)
DNA (993bp) protein (331aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteob
Sugars ABC transporter ATPase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B354_RHIRD rbh
sugars ABC transporter ATPase
scnpilot_cont_500_p_scaffold_671_23
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26584..27429)
DNA (846bp) protein (282aa)
ABC-type sugar transport system, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J1SVV3_9RHIZ rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL28329.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosi
Sugar ABC transporter, permease protein
scnpilot_cont_500_p_scaffold_671_24
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27419..28342)
DNA (924bp) protein (308aa)
ABC transporter, membrane spanning protein (Sugar) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGA3_PELHB rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KFL28330.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-
sugar ABC transporter permease
scnpilot_cont_500_p_scaffold_671_25
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28356..29621)
DNA (1266bp) protein (422aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J2KQ62_9RHIZ rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL28331.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="
sugar ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_671_26
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29650..31122)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGA1_PELHB rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KFL28332.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-
hypothetical protein
scnpilot_cont_500_p_scaffold_671_27
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31156..32199)
DNA (1044bp) protein (348aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2L8K9_9RHIZ rbh
COG1609: Transcriptional regulators {ECO:0000313|EMBL:CDP49919.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp.
Maltose operon transcriptional repressor
scnpilot_cont_500_p_scaffold_671_28
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32276..32947
DNA (672bp) protein (224aa)
Lysophospholipase L1-like esterase n=1 Tax=Rhizobium sp. CF080 RepID=J2QX66_9RHIZ
Lysophospholipase L1-like esterase
Uncharacterized protein {ECO:0000313|EMBL:KKB11597.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
scnpilot_cont_500_p_scaffold_671_29
unknown

Not on your lists

33288..33494
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_671_30
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33491..33886
DNA (396bp) protein (132aa)
SH3 type 3 domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6H9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP50181.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
SH3 type 3 domain-containing protein
Displaying items 1-30 of 31 in total

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