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scnpilot_cont_500_p_scaffold_802

Search features with annotation key words

Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_802_1
unknown

Not on your lists

comp(1..174)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_802_2
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(192..869)
DNA (678bp) protein (226aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ID80_BEII9
Uncharacterized protein {ECO:0000313|EMBL:KKC34268.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
scnpilot_cont_500_p_scaffold_802_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1042..1458
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AA05_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE94596.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
scnpilot_cont_500_p_scaffold_802_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1617..2204
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VAV6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN88192.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
scnpilot_cont_500_p_scaffold_802_5
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2243..2923
DNA (681bp) protein (227aa)
HAD-superfamily hydrolase subfamily IA, variant 3 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA18_PELHB
Haloacid dehalogenase {ECO:0000313|EMBL:KKB86740.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
HAD superfamily hydrolase
scnpilot_cont_500_p_scaffold_802_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3255..4094
DNA (840bp) protein (280aa)
Putative signal peptide protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA16_PELHB
Cell wall hydrolyse {ECO:0000313|EMBL:CDP53295.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative signal peptide protein
scnpilot_cont_500_p_scaffold_802_7
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4168..5712)
DNA (1545bp) protein (515aa)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA15_PELHB
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
phosphoenolpyruvate carboxykinase (ATP)
scnpilot_cont_500_p_scaffold_802_8
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5968..6678
DNA (711bp) protein (237aa)
DNA-binding response regulator ChvI n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA14_PELHB rbh
Transcriptional regulator {ECO:0000313|EMBL:KKB77751.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
DNA-binding response regulator ChvI
scnpilot_cont_500_p_scaffold_802_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6685..8493
DNA (1809bp) protein (603aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; De
Sensor histidine kinase ChvG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA13_PELHB rbh
sensor histidine kinase ChvG
scnpilot_cont_500_p_scaffold_802_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8490..8969
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA12_PELHB
Serine kinase of the HPr protein, regulates carboh ydrate metabolism {ECO:0000313|EMBL:CDP53423.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae
hypothetical protein
scnpilot_cont_500_p_scaffold_802_11
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9082..9480
DNA (399bp) protein (133aa)
PTS system fructose IIA component, putative n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0B6_9RHOB
PTS system permease (IIAMan), nitrogen regulatory IIA protein {ECO:0000313|EMBL:CDP53422.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devos
Putative IIA component of PTS system
scnpilot_cont_500_p_scaffold_802_12
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9507..9824
DNA (318bp) protein (106aa)
Phosphocarrier protein, nitrogen regulation associated n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL26296.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
phosphocarrier protein, nitrogen regulation associated
scnpilot_cont_500_p_scaffold_802_13
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9935..11326
DNA (1392bp) protein (464aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F7_PELHB rbh
adenosylhomocysteinase
scnpilot_cont_500_p_scaffold_802_14
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11657..14008
DNA (2352bp) protein (784aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; De
Sensor protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F6_PELHB rbh
sensor protein
scnpilot_cont_500_p_scaffold_802_15
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14042..14470
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BWL3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC64424.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_802_16
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14464..17418
DNA (2955bp) protein (985aa)
ATP-dependent nuclease subunit B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F3_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL27604.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
ATP-dependent nuclease subunit B
scnpilot_cont_500_p_scaffold_802_17
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17415..20840
DNA (3426bp) protein (1142aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosi
ATP-dependent nuclease subunit A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F2_PELHB rbh
ATP-dependent nuclease subunit A
scnpilot_cont_500_p_scaffold_802_18
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20933..21256
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F1_PELHB
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
thioredoxin protein
scnpilot_cont_500_p_scaffold_802_19
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21346..21690)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000374C5AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH51345.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
scnpilot_cont_500_p_scaffold_802_20
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21923..22255
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F1_PELHB
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
thioredoxin protein
scnpilot_cont_500_p_scaffold_802_21
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22298..23950
DNA (1653bp) protein (551aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiacea
Beta-hexosaminidase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HN77_9RHIZ rbh
beta-hexosaminidase
scnpilot_cont_500_p_scaffold_802_22
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24392..25684)
DNA (1293bp) protein (431aa)
Dihydrofolate synthase / folylpolyglutamate synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9E9_PELHB rbh
Folylpolyglutamate synthase {ECO:0000313|EMBL:KKC31498.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.
dihydrofolate synthase/folylpolyglutamate synthase
scnpilot_cont_500_p_scaffold_802_23
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25795..26754)
DNA (960bp) protein (320aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9E8_PELHB rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
acetyl-CoA carboxyl transferase subunit beta
scnpilot_cont_500_p_scaffold_802_24
Selaginella moellendorffii, Selaginella, Selaginellales, Lycopodiidae, Streptophyta, Viridiplantae

Not on your lists

27127..28173
DNA (1047bp) protein (349aa)
Putative uncharacterized protein n=1 Tax=Selaginella moellendorffii RepID=D8QTT7_SELML
Putative uncharacterized protein {ECO:0000313|EMBL:EFJ36705.1}; TaxID=88036 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; S
hypothetical protein
scnpilot_cont_500_p_scaffold_802_25
unknown

Not on your lists

28342..28629
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_802_26
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28648..28989)
DNA (342bp) protein (114aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YHC9_MESOW
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEH89229.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;
scnpilot_cont_500_p_scaffold_802_27
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29166..29807)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G470_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL75557.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
scnpilot_cont_500_p_scaffold_802_28
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30181..31503)
DNA (1323bp) protein (441aa)
UPI0003CEDFA6 related cluster n=1 Tax=unknown RepID=UPI0003CEDFA6 rbh
Putative transmembrane efflux protein {ECO:0000313|EMBL:CDX61846.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesor
transmembrane efflux protein
scnpilot_cont_500_p_scaffold_802_29
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31511..31777)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8I9Z3_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL57221.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
scnpilot_cont_500_p_scaffold_802_30
unknown

Not on your lists

comp(32052..32243)
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying items 1-30 of 44 in total

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