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scnpilot_cont_500_p_scaffold_549_curated

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_549_curated_1
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

550..870
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTC4_DELAS
Uncharacterized protein {ECO:0000313|EMBL:KEH07325.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_549_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

896..1210
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WSB2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35627.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
ArsR family transcriptional regulator
scnpilot_cont_500_p_scaffold_549_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1207..1563
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W7G8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35628.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_549_curated_4
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1642..2247
DNA (606bp) protein (202aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APL4_DELSC
scnpilot_cont_500_p_scaffold_549_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2607..3581)
DNA (975bp) protein (325aa)
endonuclease n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E47070
Endonuclease G {ECO:0000313|EMBL:EPD35630.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
DNA/RNA non-specific endonuclease; K01173 endonuclease G, mitochondrial
scnpilot_cont_500_p_scaffold_549_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3722..4933)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B PF3_DELAC">RepID=S2WPF3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34582.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
major facilitator transporter
scnpilot_cont_500_p_scaffold_549_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4945..5292)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BTD0_DELAS
hypothetical protein; K09922 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFJ10054.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_cont_500_p_scaffold_549_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5389..6057)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W7H3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35633.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_549_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6231..7565)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X6Q1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35634.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
two component, sigma54 specific, Fis family transcriptional regulator
scnpilot_cont_500_p_scaffold_549_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7550..8902)
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WBR8_DELAC
histidine kinase
scnpilot_cont_500_p_scaffold_549_curated_11
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9271..9825
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B PF7_DELAC">RepID=S2WPF7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH07317.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_549_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9841..11283
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WSC2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35637.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
diguanylate phosphodiesterase
scnpilot_cont_500_p_scaffold_549_curated_13
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11338..12612)
DNA (1275bp) protein (425aa)
Glycosyl transferase group 1 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ANR5_DELSC
Glycosyl transferase group 1 {ECO:0000313|EMBL:EZP50478.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
group 1 glycosyl transferase
scnpilot_cont_500_p_scaffold_549_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12647..14041)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W8Q8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34590.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
sigma-54 dependent trancsriptional regulator
scnpilot_cont_500_p_scaffold_549_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14089..16341)
DNA (2253bp) protein (751aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WBS5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35640.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_549_curated_16
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16359..16841)
DNA (483bp) protein (161aa)
pilus assembly protein TadE n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D50B53
Pilus assembly protein TadE {ECO:0000313|EMBL:KEH07314.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
TadE family protein
scnpilot_cont_500_p_scaffold_549_curated_17
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17018..17533)
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W4J0_DELAC
Pilus assembly protein TadE {ECO:0000313|EMBL:KEH11600.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
TadE family protein
scnpilot_cont_500_p_scaffold_549_curated_18
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17566..18015)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W7I1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH07313.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_549_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18026..19000)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X6R2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35644.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_549_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19003..20007)
DNA (1005bp) protein (335aa)
Tight adherence protein C n=2 Tax=Delftia acidovorans RepID=S2WBS9_DELAC
Tight adherence protein C {ECO:0000313|EMBL:EPD35645.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
type II secretion system protein; K12511 tight adherence protein C
scnpilot_cont_500_p_scaffold_549_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20068..21030)
DNA (963bp) protein (321aa)
Tight adherence protein B n=2 Tax=Delftia acidovorans RepID=S2W7H0_DELAC
Tight adherence protein B {ECO:0000313|EMBL:EPD34135.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
type II secretion system F domain-containing protein; K12510 tight adherence protein B
scnpilot_cont_500_p_scaffold_549_curated_22
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21027..22349)
DNA (1323bp) protein (441aa)
Pilus assembly protein CpaF n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W4K2_DELAC
Pilus assembly protein CpaF {ECO:0000313|EMBL:KEH07308.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
type II secretion system protein E; K02283 pilus assembly protein CpaF
scnpilot_cont_500_p_scaffold_549_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22357..23898)
DNA (1542bp) protein (514aa)
Pilus assembly protein CpaE n=2 Tax=Delftia acidovorans RepID=S2W7I5_DELAC
Pilus assembly protein CpaE {ECO:0000313|EMBL:EPD34137.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Flp pilus assembly protein ATPase CpaE-like protein; K02282 pilus assembly protein CpaE
scnpilot_cont_500_p_scaffold_549_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23903..25408)
DNA (1506bp) protein (502aa)
type II and III secretion system protein n=1 Tax=Chryseobacterium taeanense RepID=UPI000315EF06
Pilus assembly protein CpaC {ECO:0000313|EMBL:EPD35649.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
type II and III secretion system protein; K02280 pilus assembly protein CpaC
scnpilot_cont_500_p_scaffold_549_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25434..26480)
DNA (1047bp) protein (349aa)
Flp pilus assembly protein CpaB n=2 Tax=Delftia acidovorans RepID=S2WBT3_DELAC
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EPD34139.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Flp pilus assembly protein CpaB; K02279 pilus assembly protein CpaB
scnpilot_cont_500_p_scaffold_549_curated_26
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26673..27197)
DNA (525bp) protein (175aa)
peptidase A24A prepilin type IV; K02278 prepilin peptidase CpaA [EC:3.4.23.43]
Prepilin peptidase CpaA n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W8Y0_DELAC
Peptidase A24 {ECO:0000313|EMBL:KEH11607.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_549_curated_27
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27260..27436)
DNA (177bp) protein (59aa)
Pilus assembly protein Flp/PilA n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WSD9_DELAC
Pilus assembly protein {ECO:0000313|EMBL:KEH11608.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
Flp/Fap pilin component; K02651 pilus assembly protein Flp/PilA
scnpilot_cont_500_p_scaffold_549_curated_28
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27546..27722)
DNA (177bp) protein (59aa)
Pilus assembly protein Flp/PilA n=2 Tax=Delftia acidovorans RepID=S2W7J0_DELAC
Pilus assembly protein {ECO:0000313|EMBL:KEH11609.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
Flp/Fap pilin component; K02651 pilus assembly protein Flp/PilA
scnpilot_cont_500_p_scaffold_549_curated_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27821..29554)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W311_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34143.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
outer membrane efflux protein
scnpilot_cont_500_p_scaffold_549_curated_30
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29554..30930)
DNA (1377bp) protein (459aa)
Type I secretion membrane fusion protein, HlyD family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ANP8_DELSC
HlyD family type I secretion membrane fusion protein; K12542 membrane fusion protein LapC
Type I secretion membrane fusion protein, HlyD family {ECO:0000313|EMBL:AEF91588.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Displaying items 1-30 of 34 in total

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