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scnpilot_cont_500_p_scaffold_2896_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2896_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..285)
DNA (285bp) protein (95aa)
RNA polymerase sigma factor n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EA3653
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPD37004.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_cont_500_p_scaffold_2896_curated_2
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(389..1693)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WB94_DELAC
Lipase {ECO:0000313|EMBL:KEH11544.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
GDSL family lipase
scnpilot_cont_500_p_scaffold_2896_curated_3
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1894..3408)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WVW4_DELAC
Tripartite tricarboxylate transporter TctA {ECO:0000313|EMBL:KEH11545.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein; K07793 putative tricarboxylic transport membrane protein
scnpilot_cont_500_p_scaffold_2896_curated_4
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3408..3977)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WCJ2_DELAC
Tripartite tricarboxylate transporter TctB {ECO:0000313|EMBL:KEH06935.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein; K07794 putative tricarboxylic transport membrane protein
scnpilot_cont_500_p_scaffold_2896_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4194..5153)
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W966_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37000.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein; K07795 putative tricarboxylic transport membrane protein
scnpilot_cont_500_p_scaffold_2896_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5254..5976
DNA (723bp) protein (241aa)
Two-component system, OmpR family, response regulator TctD n=3 Tax=Bacteria RepID=S2WSN5_DELAC
Two-component system, OmpR family, response regulator TctD {ECO:0000313|EMBL:EPD36999.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
winged helix family two component transcriptional regulator; K07774 two-component system, OmpR family, response regulator TctD
scnpilot_cont_500_p_scaffold_2896_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6007..7494
DNA (1488bp) protein (496aa)
integral membrane sensor signal transduction histidine kinase; K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYH2_DELSC
scnpilot_cont_500_p_scaffold_2896_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7499..7948
DNA (450bp) protein (150aa)
Hsp15-like protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X739_DELAC
Hsp15-like protein {ECO:0000313|EMBL:EPD35724.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
RNA-binding S4 domain-containing protein; K04762 ribosome-associated heat shock protein Hsp15
scnpilot_cont_500_p_scaffold_2896_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8049..9422)
DNA (1374bp) protein (458aa)
NCS2 family nucleobase:cation symporter-2 n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WCI7_DELAC
NCS2 family nucleobase:cation symporter-2 {ECO:0000313|EMBL:EPD36996.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
xanthine/uracil/vitamin C permease; K03458 nucleobase:cation symporter-2, NCS2 family
scnpilot_cont_500_p_scaffold_2896_curated_10
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9470..10879)
DNA (1410bp) protein (470aa)
guanine deaminase (EC:3.5.4.3); K01487 guanine deaminase [EC:3.5.4.3]
Guanine deaminase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WFN4_DELAC
Chlorohydrolase {ECO:0000313|EMBL:KEH06940.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_2896_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10899..11642)
DNA (744bp) protein (248aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
pseudouridine synthase; K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Pseudouridine synthase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XAU2_DELAC
Displaying 11 items

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