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scnpilot_cont_500_p_scaffold_195_curated

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_195_curated_1
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

89..976
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RJ46_CLAMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ03236.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
scnpilot_cont_500_p_scaffold_195_curated_2
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1033..1467
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00037FF667
Uncharacterized protein {ECO:0000313|EMBL:EYT64008.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
scnpilot_cont_500_p_scaffold_195_curated_3
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2109..3467)
DNA (1359bp) protein (453aa)
ATPases involved in chromosome partitioning n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DP73_9NOCA
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CCQ18475.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
putative plasmid partitioning protein ParA
scnpilot_cont_500_p_scaffold_195_curated_4
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3872..4918
DNA (1047bp) protein (349aa)
transposase n=1 Tax=Curtobacterium sp. B18 RepID=UPI000347E5BF
putative transposase
Putative transposase {ECO:0000313|EMBL:CCG02766.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
scnpilot_cont_500_p_scaffold_195_curated_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5629..5910
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RE04_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK73475.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_cont_500_p_scaffold_195_curated_6
unknown

Not on your lists

5892..6506
DNA (615bp) protein (205aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_195_curated_7
unknown

Not on your lists

comp(6603..6848)
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_195_curated_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6871..7197)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7N9_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK73468.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
phenylalanyl-tRNA synthetase beta subunit
scnpilot_cont_500_p_scaffold_195_curated_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7243..7575
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TFL0_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK73467.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_cont_500_p_scaffold_195_curated_10
unknown

Not on your lists

comp(7584..7724)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_195_curated_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7841..8119
DNA (279bp) protein (93aa)
HTH-type transcriptional regulator CmtR n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3W4_LEIAQ
HTH-type transcriptional regulator CmtR {ECO:0000313|EMBL:ERK72183.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ArsR family transcriptional regulator
scnpilot_cont_500_p_scaffold_195_curated_12
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8212..10026
DNA (1815bp) protein (605aa)
Zinc-transporting ATPase {ECO:0000313|EMBL:KJL23773.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL23773.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
putative cadmium-transporting ATPase (EC:3.6.3.3)
ATPase P n=1 Tax=Pseudoclavibacter faecalis RepID=UPI00035F0404
scnpilot_cont_500_p_scaffold_195_curated_13
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10023..10646
DNA (624bp) protein (208aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
signal peptidase n=1 Tax=Leucobacter RepID=UPI000262A70E
scnpilot_cont_500_p_scaffold_195_curated_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10826..11428
DNA (603bp) protein (201aa)
Cadmium transporter n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEW5_9MICO
Cadmium transporter {ECO:0000313|EMBL:EXJ50573.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
cadmium resistance transporter
scnpilot_cont_500_p_scaffold_195_curated_15
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11631..13286
DNA (1656bp) protein (552aa)
TniA protein n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GGF0_PROFC
tniA; TniA protein; K07497 putative transposase
TniA protein {ECO:0000313|EMBL:CBL57611.1}; TaxID=754252 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 /; CIP 103027 / CIRM-BIA1).;"
scnpilot_cont_500_p_scaffold_195_curated_16
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13288..14193
DNA (906bp) protein (302aa)
TniB n=1 Tax=Curtobacterium sp. B18 RepID=UPI000344B45F
TniB family protein {ECO:0000313|EMBL:GAB94445.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
transposition protein TniB
scnpilot_cont_500_p_scaffold_195_curated_17
unknown

Not on your lists

comp(14247..14525)
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_195_curated_18
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15501..16310)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQB3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84347.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein; K07132
scnpilot_cont_500_p_scaffold_195_curated_19
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16310..17692)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5I1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84348.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Mu transposase/integrase
scnpilot_cont_500_p_scaffold_195_curated_20
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17699..18322)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B706_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84349.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
site-specific recombinase, DNA invertase Pin
scnpilot_cont_500_p_scaffold_195_curated_21
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18722..19624
DNA (903bp) protein (301aa)
NODE_41, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96268.1}; EC=3.6.3.3 {ECO:0000313|EMBL:KIQ96268.1};; EC=3.6.3.4 {ECO:0000313|EMBL:KIQ96268.1};; EC=3.6.3.5 {ECO:0000313|EMBL:KIQ96268.1};; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
heavy metal-translocating P-type ATPase; K01552 [EC:3.6.3.-]
ATPase P n=1 Tax=Agromyces italicus RepID=UPI0003B62A7B
scnpilot_cont_500_p_scaffold_195_curated_22
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19645..20565
DNA (921bp) protein (307aa)
heavy metal translocating P-type ATPase; K01552 [EC:3.6.3.-]
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LCH1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ERG64858.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
scnpilot_cont_500_p_scaffold_195_curated_23
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20843..21385
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003660CFB
Uncharacterized protein {ECO:0000313|EMBL:CEP25553.1}; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. freudenreichii.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_195_curated_24
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21382..22134
DNA (753bp) protein (251aa)
Putative uncharacterized protein id=7720681 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Membrane protein {ECO:0000313|EMBL:KIC66739.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_195_curated_25
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22344..24656
DNA (2313bp) protein (771aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
catalase/peroxidase HPI; K03782 catalase-peroxidase [EC:1.11.1.21]
catalase/hydroperoxidase HPI(I) n=1 Tax=Methylobacterium sp. 88A RepID=UPI00035F9391
scnpilot_cont_500_p_scaffold_195_curated_26

Not on your lists

25011..25643
DNA (633bp) protein (211aa)
resolvase n=1 Tax=Curtobacterium sp. B18 RepID=UPI00034AB14C
Transposon Tn552 resolvase {ECO:0000313|EMBL:AFN66366.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Resolvase domain protein
scnpilot_cont_500_p_scaffold_195_curated_27
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25821..27077)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCQ2_9MICO
Magnesium transporter MgtE {ECO:0000313|EMBL:KJL37853.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_195_curated_28
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27121..28761)
DNA (1641bp) protein (547aa)
Metal ion (Mn2+/Fe2+) transporter (Nramp) family metal ion transporter n=2 Tax=Microbacterium RepID=S3ABB7_9MICO
Divalent metal cation transporter MntH {ECO:0000313|EMBL:KJL37854.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
manganese transport protein
scnpilot_cont_500_p_scaffold_195_curated_29
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29274..29696
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL37855.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
scnpilot_cont_500_p_scaffold_195_curated_30
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

30002..30205
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00036400EA
Uncharacterized protein {ECO:0000313|EMBL:KIF25472.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
Displaying items 1-30 of 71 in total

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