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scnpilot_cont_500_p_scaffold_175_curated

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_175_curated_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56..805)
DNA (750bp) protein (250aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T004_LEIAQ
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ERK70833.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_cont_500_p_scaffold_175_curated_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1284..1481)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SYJ4_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70318.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_cont_500_p_scaffold_175_curated_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1584..2165
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6H7_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK70317.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_cont_500_p_scaffold_175_curated_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2178..3326
DNA (1149bp) protein (383aa)
Site-specific recombinase, phage integrase family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RN89_LEIAQ
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERK70316.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
phage-related integrase
scnpilot_cont_500_p_scaffold_175_curated_5
unknown

Not on your lists

comp(3282..3524)
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_175_curated_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3865..5160)
DNA (1296bp) protein (432aa)
Cell envelope-like function transcriptional attenuator common domain protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRP6_LEIAQ
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:ERK71496.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_175_curated_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5296..6117)
DNA (822bp) protein (274aa)
Cof-like hydrolase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R8D8_LEIAQ
Cof-like hydrolase {ECO:0000313|EMBL:ERK71495.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_175_curated_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6114..7307)
DNA (1194bp) protein (398aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] rbh
Serine--tRNA ligase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSH9_LEIAQ
scnpilot_cont_500_p_scaffold_175_curated_9
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7440..8438
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P886_LEIXC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW42495.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_cont_500_p_scaffold_175_curated_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8701..9351)
DNA (651bp) protein (217aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R2Z6_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK69635.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_cont_500_p_scaffold_175_curated_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9380..10402)
DNA (1023bp) protein (341aa)
Prephenate dehydratase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T853_LEIAQ
Prephenate dehydratase {ECO:0000313|EMBL:ERK70882.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
prephenate dehydratase
scnpilot_cont_500_p_scaffold_175_curated_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10438..12054
DNA (1617bp) protein (539aa)
pgm; phosphoglucomutase (EC:5.4.2.2); K01835 phosphoglucomutase [EC:5.4.2.2] rbh
Phosphoglucomutase, alpha-D-glucose phosphate-specific n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPW7_LEIAQ
Phosphoglucomutase, alpha-D-glucose phosphate-specific {ECO:0000313|EMBL:ERK70881.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_cont_500_p_scaffold_175_curated_13
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12137..13075
DNA (939bp) protein (313aa)
RNA polymerase sigma factor n=1 Tax=Dietzia sp. UCD-THP RepID=UPI00037DC2A8
Polyphosphate kinase {ECO:0000313|EMBL:KGF02293.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_175_curated_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13093..14265)
DNA (1173bp) protein (391aa)
GAF domain protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2REE2_LEIAQ
GAF domain protein {ECO:0000313|EMBL:ERK73630.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
GAR sensor-containing protein serine phosphatase
scnpilot_cont_500_p_scaffold_175_curated_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14335..15159)
DNA (825bp) protein (275aa)
Serine-type D-Ala-D-Ala carboxypeptidase (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RY07_LEIAQ
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ERK73631.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
transcription termination factor Rho
scnpilot_cont_500_p_scaffold_175_curated_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15208..16068)
DNA (861bp) protein (287aa)
IPT/TIG domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RMC8_LEIAQ
IPT/TIG domain protein {ECO:0000313|EMBL:ERK69981.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_175_curated_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16445..18574
DNA (2130bp) protein (710aa)
MFS transporter n=1 Tax=Humibacter albus RepID=UPI0003B485A6
Drug resistance MFS transporter, drug:H+ antiporter-2 family {ECO:0000313|EMBL:ERK69980.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
permease of the major facilitator superfamily
scnpilot_cont_500_p_scaffold_175_curated_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18590..19906)
DNA (1317bp) protein (439aa)
Transporter, CPA2 family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RR07_LEIAQ
Transporter, CPA2 family {ECO:0000313|EMBL:ERK71281.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Na+/H+ antiporter
scnpilot_cont_500_p_scaffold_175_curated_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20215..21540
DNA (1326bp) protein (442aa)
ABC transporter, solute-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T9A4_LEIAQ
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERK71282.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar-binding transport lipoprotein; K10240 cellobiose transport system substrate-binding protein
scnpilot_cont_500_p_scaffold_175_curated_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21620..22732
DNA (1113bp) protein (371aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCH6_LEIAQ
ABC transporter, permease protein {ECO:0000313|EMBL:ERK72397.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar transport integral membrane protein; K10241 cellobiose transport system permease protein
scnpilot_cont_500_p_scaffold_175_curated_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22729..23613
DNA (885bp) protein (295aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUF5_LEIAQ
ABC transporter, permease protein {ECO:0000313|EMBL:ERK72396.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar transport integral membrane protein; K10242 cellobiose transport system permease protein
scnpilot_cont_500_p_scaffold_175_curated_22
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23616..25097
DNA (1482bp) protein (494aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
bglC; beta-glucosidase BglC (EC:3.2.1.21); K05350 beta-glucosidase [EC:3.2.1.21]
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036AA6E8
scnpilot_cont_500_p_scaffold_175_curated_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25125..26147
DNA (1023bp) protein (341aa)
Putative ribose operon repressor n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCX1_LEIAQ
Putative ribose operon repressor {ECO:0000313|EMBL:ERK73090.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_cont_500_p_scaffold_175_curated_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26377..27297)
DNA (921bp) protein (307aa)
PfkB domain-containing protein; K00852 ribokinase [EC:2.7.1.15]
Putative ribokinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RX43_LEIAQ
Putative ribokinase {ECO:0000313|EMBL:ERK73089.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_cont_500_p_scaffold_175_curated_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27294..28736)
DNA (1443bp) protein (481aa)
Transporter, major facilitator family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6J2_LEIAQ
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK73088.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
major facilitator superfamily protein
scnpilot_cont_500_p_scaffold_175_curated_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28733..29716)
DNA (984bp) protein (328aa)
inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1); K01239 purine nucleosidase [EC:3.2.2.1]
Putative cytidine/uridine-specific hydrolase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TEH7_LEIAQ
Putative cytidine/uridine-specific hydrolase {ECO:0000313|EMBL:ERK73087.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_cont_500_p_scaffold_175_curated_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29819..30865
DNA (1047bp) protein (349aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWF0_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK73086.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
LacI family transcriptional regulator
scnpilot_cont_500_p_scaffold_175_curated_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31164..31994)
DNA (831bp) protein (277aa)
PAP2 family protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RMT1_LEIAQ
PAP2 family protein {ECO:0000313|EMBL:ERK70161.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_175_curated_29
Streptomyces sp. SPB78, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32079..32849
DNA (771bp) protein (257aa)
Transcriptional regulator n=1 Tax=Streptomyces sp. SPB78 RepID=D9UQS2_9ACTO
Transcriptional regulator {ECO:0000313|EMBL:EFK98088.1}; TaxID=591157 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB78).;"
Transcriptional regulator, AraC family
scnpilot_cont_500_p_scaffold_175_curated_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32913..33761
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SVJ5_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK66517.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein; K07090
Displaying items 1-30 of 100 in total

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