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SCNpilot_cont_750_bf_scaffold_1009

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1009_1
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

296..1627
DNA (1332bp) protein (444aa)
Putative Phage integrase family protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FTV3_PHAMO rbh
phage integrase family
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_750_bf_scaffold_1009_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1624..1860)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MCA0_RHIL3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK09431.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_750_bf_scaffold_1009_3
unknown

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comp(1875..2096)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1009_4
unknown

Not on your lists

2596..2961
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1009_5
unknown

Not on your lists

2961..3287
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1009_6
unknown

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3459..4235
DNA (777bp) protein (259aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1009_7
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4253..4510
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QKW8_METTR
Uncharacterized protein {ECO:0000313|EMBL:KJR67290.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
phage-like protein
SCNpilot_cont_750_bf_scaffold_1009_8
unknown

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4507..4773
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1009_9
unknown

Not on your lists

4891..5232
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1009_10
unknown

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comp(5366..6076)
DNA (711bp) protein (237aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1009_11
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6588..7823
DNA (1236bp) protein (412aa)
Phage portal protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RPY8_9RHIZ rbh
Phage portal protein {ECO:0000313|EMBL:ESR25250.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
Portal protein-like protein rbh
SCNpilot_cont_750_bf_scaffold_1009_12
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7820..8359
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PR26_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM76258.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
peptidase U35, phage prohead HK97; K06904
SCNpilot_cont_750_bf_scaffold_1009_13
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8356..9531
DNA (1176bp) protein (392aa)
Phage major capsid protein, HK97 family n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QKW0_METTR rbh
Phage major capsid protein {ECO:0000313|EMBL:ESR25251.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
phage major capsid protein, HK97 family
SCNpilot_cont_750_bf_scaffold_1009_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9550..9981
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000360EE1C
Uncharacterized protein {ECO:0000313|EMBL:KIZ41436.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1009_15
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10108..10995
DNA (888bp) protein (296aa)
Uncharacterized protein n=2 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XZ68_PARAH
hypothetical protein
HNH nuclease {ECO:0000313|EMBL:AGT09974.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_cont_750_bf_scaffold_1009_16
unknown

Not on your lists

10992..11381
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1009_17
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11365..11892
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JSC0_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM35613.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_750_bf_scaffold_1009_18
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11893..14307
DNA (2415bp) protein (805aa)
Uncharacterized protein (Fragment) n=1 Tax=Oceanibaculum indicum P24 RepID=K2J1M2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE68687.1}; Flags: Fragment;; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1009_19
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14322..14912
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TGM7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR25253.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
phage protein
SCNpilot_cont_750_bf_scaffold_1009_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14912..15316
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037A4684
Terminase {ECO:0000313|EMBL:KIZ43103.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
phage terminase, small subunit , P27
SCNpilot_cont_750_bf_scaffold_1009_21

Not on your lists

15288..16889
DNA (1602bp) protein (534aa)
Terminase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QKV6_METTR
Uncharacterized protein {ECO:0000313|EMBL:KKN94444.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Phage terminase-like protein
SCNpilot_cont_750_bf_scaffold_1009_22
unknown

Not on your lists

17032..17580
DNA (549bp) protein (183aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1009_23
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17573..18196
DNA (624bp) protein (208aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000255|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00210}; Short=EPSP synthase {ECO:0000255|HAMAP-Rule:MF_00210};; Short=EPSPS {ECO:0000255|HAMAP-Rule:MF_00210};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=AROA_PARL1
SCNpilot_cont_750_bf_scaffold_1009_24
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18183..18842
DNA (660bp) protein (220aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=AROA_PARL1
Displaying 24 items

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