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SCNpilot_cont_750_bf_scaffold_1083

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1083_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(135..494)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D5319A
Uroporphyrin-III methyltransferase {ECO:0000313|EMBL:AIF46407.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1083_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(599..2620)
DNA (2022bp) protein (674aa)
AMP-dependent synthetase and ligase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAG2_NAKMY
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACV77327.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1083_3
unknown

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comp(2617..2736)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1083_4
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2778..3701
DNA (924bp) protein (308aa)
putative hydrolase (EC:3.1.-.-)
Putative hydrolase {ECO:0000313|EMBL:CCH35310.1}; EC=3.1.-.- {ECO:0000313|EMBL:CCH35310.1};; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Putative hydrolase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K4V0_SACES
SCNpilot_cont_750_bf_scaffold_1083_5
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3807..5042)
DNA (1236bp) protein (412aa)
ATPase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B7635B
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:EGD40578.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
BadF/BadG/BcrA/BcrD type ATPase
SCNpilot_cont_750_bf_scaffold_1083_6
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5135..6040
DNA (906bp) protein (302aa)
sugar isomerase n=1 Tax=Humibacter albus RepID=UPI0003B6FE19 rbh
RpiR family transcriptional regulator {ECO:0000313|EMBL:AJT42301.1}; TaxID=1618207 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
RpiR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1083_7
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6033..6890
DNA (858bp) protein (286aa)
sugar isomerase n=1 Tax=Humibacter albus RepID=UPI0003B4BB39 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJL29457.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCNpilot_cont_750_bf_scaffold_1083_8
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6880..8382
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B7AB99 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN37537.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
sugar ABC transporter substrate-binding protein; K10200 N-acetylglucosamine transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_1083_9
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8509..9981
DNA (1473bp) protein (491aa)
sugar ABC transporter permease n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B5CE29 rbh
Transmembrane transport protein {ECO:0000313|EMBL:EMF24007.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
SC7b7.03; transmembrane transport protein; K10201 N-acetylglucosamine transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_1083_10
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9987..10886
DNA (900bp) protein (300aa)
sugar ABC transporter permease n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B727D7 rbh
binding-protein-dependent transport system inner membrane protein; K10202 N-acetylglucosamine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACQ82235.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_750_bf_scaffold_1083_11
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10938..11213)
DNA (276bp) protein (92aa)
XRE family transcriptional regulator n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TX76_9NOCA
XRE family transcriptional regulator {ECO:0000313|EMBL:ELB94584.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
XRE family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1083_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11428..12393)
DNA (966bp) protein (322aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAG0_NAKMY rbh
phospholipid/glycerol acyltransferase rbh
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ACV77325.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1083_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12390..13541)
DNA (1152bp) protein (384aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] rbh
NAD-dependent epimerase/dehydratase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAF9_NAKMY rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACV77324.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1083_14
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13569..13670)
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAF8_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV77323.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1083_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13808..14083)
DNA (276bp) protein (92aa)
DNA binding domain protein, excisionase family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAF7_NAKMY
excisionase family DNA binding domain-containing protein
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ACV77322.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1083_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14274..15080)
DNA (807bp) protein (269aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] rbh
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104)
Pyrroline-5-carboxylate reductase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAE4_NAKMY rbh
SCNpilot_cont_750_bf_scaffold_1083_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15204..15698
DNA (495bp) protein (165aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAB4_NAKMY
major facilitator superfamily protein; K03449 MFS transporter, CP family, cyanate transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACV77279.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying 17 items

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