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SCNpilot_cont_750_bf_scaffold_1140

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1140_1
unknown

Not on your lists

comp(2..124)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1140_2
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(144..1106)
DNA (963bp) protein (321aa)
ferredoxin n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628535
Phenoxybenzoate dioxygenase beta subunit {ECO:0000313|EMBL:AIJ22834.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
phthalate 4,5-dioxygenase
SCNpilot_cont_750_bf_scaffold_1140_3
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1119..2003)
DNA (885bp) protein (295aa)
tryptophan 23-dioxygenase; K00453 tryptophan 2,3-dioxygenase [EC:1.13.11.11]
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum
Tryptophan 2,3-dioxygenase n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WFN6_ACTMD
SCNpilot_cont_750_bf_scaffold_1140_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2276..3121)
DNA (846bp) protein (282aa)
D-aminopeptidase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BC19_STRRD rbh
D-aminopeptidase; K02035 peptide/nickel transport system substrate-binding protein rbh
D-aminopeptidase {ECO:0000313|EMBL:ACZ88042.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_750_bf_scaffold_1140_5
unknown

Not on your lists

3835..4026
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1140_6
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4023..5147
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2YZ63_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD69566.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
glutamate carboxypeptidase
SCNpilot_cont_750_bf_scaffold_1140_7
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5217..5348)
DNA (132bp) protein (44aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 141 RepID=UPI00035FE3AE
Uncharacterized protein {ECO:0000313|EMBL:GAF49358.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
SCNpilot_cont_750_bf_scaffold_1140_8
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5731..6657
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LNL9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL16835.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_cont_750_bf_scaffold_1140_9
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6657..7775
DNA (1119bp) protein (373aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_01933}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_01933};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_01933};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rule:MF_01933};; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase {ECO:0000256|HAMAP-Rule:MF_01933}; o-succinylbenzoic acid synthase {ECO:0000256|HAMAP-Rule:MF_01933}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
menC; o-succinylbenzoate synthase (EC:4.2.1.113) rbh
O-succinylbenzoate synthase n=1 Tax=Amycolatopsis methanolica RepID=UPI0003781A8D
SCNpilot_cont_750_bf_scaffold_1140_10
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7781..9394
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNT302 RepID=UPI0003713B23 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF59752.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
transcriptional regulator CdaR
SCNpilot_cont_750_bf_scaffold_1140_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9943..12393)
DNA (2451bp) protein (817aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X981_NAKMY rbh
DEAD/DEAH box helicase; K06877 DEAD/DEAH box helicase domain-containing protein rbh
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACV77149.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1140_12
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12470..13906)
DNA (1437bp) protein (479aa)
Sodium:dicarboxylate symporter n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S9Q9_MICSL rbh
sodium:dicarboxylate symporter rbh
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:ADL44996.1}; Flags: Precursor;; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
SCNpilot_cont_750_bf_scaffold_1140_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14468..16792
DNA (2325bp) protein (775aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipart
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] rbh
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X982_NAKMY rbh
SCNpilot_cont_750_bf_scaffold_1140_14
unknown

Not on your lists

16920..17654
DNA (735bp) protein (245aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1140_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17743..18327
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X983_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV77151.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1140_16
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18664..21639
DNA (2976bp) protein (992aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CCH27663.1}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CCH27663.1};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2]
DNA topoisomerase I n=1 Tax=Saccharomonospora saliphila RepID=UPI000366ED0C
SCNpilot_cont_750_bf_scaffold_1140_17
Corynebacterium sp. KPL1821, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21793..22533
DNA (741bp) protein (247aa)
Uncharacterized protein n=5 Tax=Corynebacterium RepID=U7KV06_9CORY
Uncharacterized protein {ECO:0000313|EMBL:ERS55841.1}; TaxID=1203560 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium sp. KPL1821.;"
Fe-S oxidoreductase
SCNpilot_cont_750_bf_scaffold_1140_18
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22631..24904
DNA (2274bp) protein (758aa)
major facilitator superfamily protein; K00943 dTMP kinase [EC:2.7.4.9] rbh
Major facilitator superfamily MFS_1 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X986_NAKMY rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACV77154.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1140_19
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

25153..25788
DNA (636bp) protein (212aa)
Methyltransferase type 12 n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B772_HERA2
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ABX06355.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_cont_750_bf_scaffold_1140_20
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25789..26970
DNA (1182bp) protein (394aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] rbh
DNA-directed DNA polymerase {ECO:0000313|EMBL:ACV77157.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ACV77157.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
DNA-directed DNA polymerase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X989_NAKMY rbh
SCNpilot_cont_750_bf_scaffold_1140_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27022..27846
DNA (825bp) protein (275aa)
PSP1 domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X991_NAKMY rbh
PSP1 domain-containing protein rbh
PSP1 domain protein {ECO:0000313|EMBL:ACV77159.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1140_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28150..29484
DNA (1335bp) protein (445aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X996_NAKMY rbh
ErfK/YbiS/YcfS/YnhG family protein rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ACV77164.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1140_23
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29831..30952
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0S199_MYCXE
Uncharacterized protein {ECO:0000313|EMBL:EID17152.1}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;"
putative integrase
SCNpilot_cont_750_bf_scaffold_1140_24
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31221..32258
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6WQ93_PROPF rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFN45271.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
SCNpilot_cont_750_bf_scaffold_1140_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32357..34594)
DNA (2238bp) protein (746aa)
TrwC relaxase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XHE2_NAKMY
TrwC relaxase
TrwC relaxase {ECO:0000313|EMBL:ACV78348.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1140_26
unknown

Not on your lists

34741..34941
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1140_27
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35495..35647
DNA (153bp) protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:EUA41505.1}; TaxID=1299334 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi 4042.;"
SCNpilot_cont_750_bf_scaffold_1140_28
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36767..38620)
DNA (1854bp) protein (618aa)
GCN5-related N-acetyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8J6_NAKMY rbh
N-acetyltransferase GCN5 rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACV79051.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying 28 items

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