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SCNpilot_cont_750_bf_scaffold_1169

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1169_1
unknown

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2..208
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1169_2
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(602..1354)
DNA (753bp) protein (251aa)
membrane protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00036A192F
Uncharacterized protein {ECO:0000313|EMBL:GAJ80489.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
hypothetical protein; K07090
SCNpilot_cont_750_bf_scaffold_1169_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(1351..2433)
DNA (1083bp) protein (361aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] rbh
Putative phenylalanine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01513}; EC=2.6.1.- {ECO:0000256|HAMAP-Rule:MF_01513};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Putative phenylalanine aminotransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XK50_NAKMY rbh
SCNpilot_cont_750_bf_scaffold_1169_4
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2562..3299
DNA (738bp) protein (246aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:KDA43020.1}; EC=3.1.1.45 {ECO:0000313|EMBL:KDA43020.1};; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
Carboxymethylenebutenolidase n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J9R6_FRASC
SCNpilot_cont_750_bf_scaffold_1169_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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3359..5326
DNA (1968bp) protein (656aa)
acetoacetyl-CoA synthase; K01907 acetoacetyl-CoA synthetase [EC:6.2.1.16] rbh
Acetoacetyl-CoA synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XK51_NAKMY rbh
Acetoacetyl-CoA synthase {ECO:0000313|EMBL:ACV76734.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1169_6
unknown

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5860..6357
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1169_7
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(6366..7511)
DNA (1146bp) protein (382aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Saccharomonospora glauca K62 RepID=I1D3J6_9PSEU
type 12 methyltransferase
Tax=RBG_16_Chloroflexi_68_14_curated
SCNpilot_cont_750_bf_scaffold_1169_8
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7658..8329
DNA (672bp) protein (224aa)
Transcriptional regulator, HxlR family n=1 Tax=Mycobacterium marinum str. Europe RepID=S7SQJ2_MYCMR
Putative HTH-type transcriptional regulator yybR {ECO:0000313|EMBL:KJF20297.1}; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
HxlR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1169_9
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8846..9145)
DNA (300bp) protein (100aa)
XRE family transcriptional regulator n=1 Tax=Saccharomonospora halophila RepID=UPI000379A5AC
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEH10478.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
SCNpilot_cont_750_bf_scaffold_1169_10
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9142..9492)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7B3A0
Uncharacterized protein {ECO:0000313|EMBL:AHH93452.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1169_11
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9596..9904
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00035E57C1
ethyl tert-butyl ether degradation EthD
Ethyl tert-butyl ether degradation EthD {ECO:0000313|EMBL:AEL24614.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
SCNpilot_cont_750_bf_scaffold_1169_12
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10028..10378)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00037503C5
Uncharacterized protein {ECO:0000313|EMBL:KJK23789.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1169_13
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10375..10665)
DNA (291bp) protein (97aa)
DNA polymerase, beta-like region-containing protein n=3 Tax=Azotobacter vinelandii RepID=C1DLC0_AZOVD
DNA polymerase, beta-like region-containing protein
DNA polymerase, beta-like region-containing protein {ECO:0000313|EMBL:ACO81113.1}; TaxID=322710 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii (strain DJ / ATCC BAA-1303).;"
SCNpilot_cont_750_bf_scaffold_1169_14
Streptomyces sp. SPB78, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10882..12234)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI00034B1DF1 rbh
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EFK99702.1}; TaxID=591157 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB78).;"
6-phospho-beta-glucosidase rbh
SCNpilot_cont_750_bf_scaffold_1169_15
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12259..13332
DNA (1074bp) protein (358aa)
sugar kinase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5A472 rbh
Sugar kinase {ECO:0000313|EMBL:ELT45384.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
ribokinase-like domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_1169_16
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13477..14583
DNA (1107bp) protein (369aa)
sugar binding protein n=1 Tax=Thermococcus zilligii RepID=UPI00029A0FCA
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADP83577.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
Displaying 16 items

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