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SCNpilot_cont_750_bf_scaffold_1227

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1227_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168..665)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK21_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99812.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1227_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(845..2287)
DNA (1443bp) protein (481aa)
Phospholipase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK20_9GAMM
Phospholipase {ECO:0000313|EMBL:EIL99811.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1227_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2420..3175
DNA (756bp) protein (252aa)
Lipoprotein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W115_9GAMM rbh
Lipoprotein {ECO:0000313|EMBL:EIL93156.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
lipoprotein transmembrane
SCNpilot_cont_750_bf_scaffold_1227_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3226..4656)
DNA (1431bp) protein (477aa)
Aldehyde dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W711_9GAMM rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EIL95252.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NAD-dependent aldehyde dehydrogenase rbh
SCNpilot_cont_750_bf_scaffold_1227_5
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4938..6734
DNA (1797bp) protein (599aa)
thiamine pyrophosphate protein (EC:1.2.2.2); K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1] rbh
Pyruvate oxidase {ECO:0000313|EMBL:ABA56994.1}; EC=2.2.1.6 {ECO:0000313|EMBL:ABA56994.1};; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;"
Pyruvate oxidase n=2 Tax=Nitrosococcus oceani RepID=Q3JDV2_NITOC rbh
SCNpilot_cont_750_bf_scaffold_1227_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6745..7827
DNA (1083bp) protein (361aa)
Putative racemase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FVH9_SORC5
racemase
Putative racemase {ECO:0000313|EMBL:CAN92278.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_cont_750_bf_scaffold_1227_7
unknown

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7865..8062
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1227_8
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

8059..11019
DNA (2961bp) protein (987aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00036EED35 rbh
FAD linked oxidase domain protein {ECO:0000313|EMBL:CCF82967.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
FAD linked oxidase; K06911 rbh
SCNpilot_cont_750_bf_scaffold_1227_9
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11016..12089
DNA (1074bp) protein (358aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5S6M0_9PLAN rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMI21824.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
short chain dehydrogenase rbh
SCNpilot_cont_750_bf_scaffold_1227_10
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12086..12463
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WIU0_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ20330.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
SCNpilot_cont_750_bf_scaffold_1227_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12585..13856)
DNA (1272bp) protein (424aa)
Exodeoxyribonuclease VII large subunit (EC:3.1.11.6) rbh
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NEN3_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_1227_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13954..14409)
DNA (456bp) protein (152aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W718_9GAMM
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:EIL95259.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
SCNpilot_cont_750_bf_scaffold_1227_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14369..15337)
DNA (969bp) protein (323aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NES6_9GAMM
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:AGG89304.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1227_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15354..17348
DNA (1995bp) protein (665aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK14_9GAMM rbh
Acetyl-CoA hydrolase/transferase {ECO:0000313|EMBL:EIL99805.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_1227_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17508..17690)
DNA (183bp) protein (61aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK13_9GAMM
cytochrome oxidase maturation protein, cbb3-type
Cbb3-type cytochrome oxidase maturation protein {ECO:0000313|EMBL:EIL93167.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_750_bf_scaffold_1227_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17687..19888)
DNA (2202bp) protein (734aa)
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter denitrificans RepID=M4NNN6_9GAMM rbh
heavy metal translocating P-type ATPase rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AGG89301.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1227_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19885..20124)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDM0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97561.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1227_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20108..21016)
DNA (909bp) protein (303aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W722_9GAMM rbh
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c oxidase, cbb3-type, subunit III rbh
SCNpilot_cont_750_bf_scaffold_1227_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21131..21796)
DNA (666bp) protein (222aa)
Cbb3-type cytochrome c oxidase subunit II n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W724_9GAMM rbh
Cbb3-type cytochrome c oxidase subunit II {ECO:0000313|EMBL:EIL95265.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c oxidase, cbb3-type, subunit II
SCNpilot_cont_750_bf_scaffold_1227_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21809..21964)
DNA (156bp) protein (52aa)
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Rhodanobacter denitrificans RepID=I4WX98_9GAMM
cytochrome c oxidase, cbb3-type, subunit I
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 20 items

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