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SCNpilot_cont_750_bf_scaffold_1263

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1263_1
unknown

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1..120
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1263_2

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comp(179..958)
DNA (780bp) protein (260aa)
Deaminase-reductase domain-containing protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGP8_9CHLR
RibD C-terminal domain protein {ECO:0000313|EMBL:AIA15813.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
deaminase-reductase domain-containing protein
SCNpilot_cont_750_bf_scaffold_1263_3
unknown

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1146..2555
DNA (1410bp) protein (470aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1263_4
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2585..3571
DNA (987bp) protein (329aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470, ECO:0000256|SAAS:SAAS00050627}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rule:MF_00470, ECO:0000256|SAAS:SAAS00050577};; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00470}; o-succinylbenzoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00470}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae
menC1; putative o-succinylbenzoate synthase (EC:4.2.1.113)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003711921
SCNpilot_cont_750_bf_scaffold_1263_5
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3588..4028)
DNA (441bp) protein (147aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
nucleotide-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B2E685
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1263_6
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4025..4294)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6VKT1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB96798.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
CopG family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1263_7
unknown

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comp(4362..5243)
DNA (882bp) protein (294aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1263_8
unknown

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comp(5329..5679)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1263_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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5842..7593
DNA (1752bp) protein (584aa)
thiamine pyrophosphate domain-containing TPP-binding protein; K02551 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] rbh
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / J
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAK9_NAKMY rbh
SCNpilot_cont_750_bf_scaffold_1263_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7665..8003
DNA (339bp) protein (113aa)
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_cont_750_bf_scaffold_1263_11
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8622..10007)
DNA (1386bp) protein (462aa)
isochorismate synthase; K02552 menaquinone-specific isochorismate synthase [EC:5.4.4.2]
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI0003814D52
Isochorismate synthase {ECO:0000313|EMBL:AEE45067.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_750_bf_scaffold_1263_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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10212..10898
DNA (687bp) protein (229aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] rbh
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Demethylmenaquinone methyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBB9_NAKMY rbh
SCNpilot_cont_750_bf_scaffold_1263_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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11254..12663
DNA (1410bp) protein (470aa)
Geranylgeranyl reductase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBC0_NAKMY rbh
geranylgeranyl reductase rbh
Geranylgeranyl reductase {ECO:0000313|EMBL:ACV77382.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1263_14
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12862..13236
DNA (375bp) protein (125aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBC1_NAKMY
SCNpilot_cont_750_bf_scaffold_1263_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13261..13848
DNA (588bp) protein (196aa)
NADH dehydrogenase subunit B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
NADH-quinone oxidoreductase subunit B n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBC2_NAKMY rbh
SCNpilot_cont_750_bf_scaffold_1263_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13845..14597
DNA (753bp) protein (251aa)
NADH dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
NADH-quinone oxidoreductase subunit C n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBC3_NAKMY rbh
SCNpilot_cont_750_bf_scaffold_1263_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14594..15895
DNA (1302bp) protein (434aa)
NADH dehydrogenase subunit D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
NADH-quinone oxidoreductase subunit D n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBC4_NAKMY
SCNpilot_cont_750_bf_scaffold_1263_18
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15892..16290
DNA (399bp) protein (133aa)
NADH dehydrogenase (ubiquinone) 24 kDa subunit; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3]
NADH dehydrogenase (Ubiquinone) 24 kDa subunit n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBC5_NAKMY
NADH dehydrogenase (Ubiquinone) 24 kDa subunit {ECO:0000313|EMBL:ACV77387.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying 18 items

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