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SCNpilot_cont_750_bf_scaffold_1265

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1265_1
unknown

Not on your lists

comp(19..630)
DNA (612bp) protein (204aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1265_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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992..1213
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037FC4D4
Uncharacterized protein {ECO:0000313|EMBL:EKF42416.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1265_3
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1210..3120
DNA (1911bp) protein (637aa)
Putative uncharacterized protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CYA6_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEX08368.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter lacuscaerulensis ITI-1157.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_1265_4
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3110..3946
DNA (837bp) protein (279aa)
UPI0003D0052C related cluster n=2 Tax=unknown RepID=UPI0003D0052C
Uncharacterized protein {ECO:0000313|EMBL:ESZ12900.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
SCNpilot_cont_750_bf_scaffold_1265_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3949..4698
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B7BBDD
Uncharacterized protein {ECO:0000313|EMBL:CDX38535.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1265_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5213..5992)
DNA (780bp) protein (260aa)
putative short-chain dehydrogenase/reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Rhodovulum sp. PH10 RepID=J6J8A9_9RHOB rbh
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EJW12115.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
SCNpilot_cont_750_bf_scaffold_1265_7
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6007..6882)
DNA (876bp) protein (292aa)
Amidohydrolase 2 n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CAI5_ALCDB rbh
amidohydrolase rbh
Amidohydrolase 2 {ECO:0000313|EMBL:AFT69638.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
SCNpilot_cont_750_bf_scaffold_1265_8
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6915..7298)
DNA (384bp) protein (128aa)
endoribonuclease L-PSP n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003750632
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AFT69639.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
SCNpilot_cont_750_bf_scaffold_1265_9
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7441..7725)
DNA (285bp) protein (95aa)
YciI family protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNE7_TISMK
Uncharacterized protein {ECO:0000313|EMBL:KJV09549.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
YciI family protein
SCNpilot_cont_750_bf_scaffold_1265_10
unknown

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7951..8079
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1265_11
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8191..9003)
DNA (813bp) protein (271aa)
TetR family transcriptional regulator n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TI98_TISMK
Uncharacterized protein {ECO:0000313|EMBL:AKH21995.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
acnR; TetR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1265_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

9244..10059
DNA (816bp) protein (272aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3W7_SPHTD
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ACZ38934.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_750_bf_scaffold_1265_13
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10062..10901
DNA (840bp) protein (280aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LUT3_9BURK
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EJL89143.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein
SCNpilot_cont_750_bf_scaffold_1265_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10973..12058
DNA (1086bp) protein (362aa)
NMT1/THI5 like domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3W5_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KIZ47795.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
NMT1/THI5 like domain-containing protein; K02051 NitT/TauT family transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_1265_15
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12197..12976
DNA (780bp) protein (260aa)
oxidoreductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Putative short chain dehydrogenase/reductase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2N6_HERAR
Putative short chain dehydrogenase/reductase {ECO:0000313|EMBL:CAL60773.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
SCNpilot_cont_750_bf_scaffold_1265_16
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13013..13318
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TRZ5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE09233.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1265_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13480..16788
DNA (3309bp) protein (1103aa)
indolepyruvate ferredoxin oxidoreductase; K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CQW9_9BRAD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_750_bf_scaffold_1265_18
unknown

Not on your lists

16891..17043
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1265_19
Gordonia malaquae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17091..17459
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3VBN0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC80548.1}; TaxID=1223542 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia malaquae NBRC 108250.;"
hypothetical protein
Displaying 19 items

View Taxonomy