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SCNpilot_cont_750_bf_scaffold_1274

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1274_1
unknown

Not on your lists

comp(1..150)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1274_2
unknown

Not on your lists

comp(277..438)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1274_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(785..1342)
DNA (558bp) protein (186aa)
Bll3557 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89PC5_BRADU rbh
cytochrome B561; K12262 cytochrome b561 rbh
Putative cytochrome B561 {ECO:0000313|EMBL:KGJ69092.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_750_bf_scaffold_1274_4
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1510..1791)
DNA (282bp) protein (94aa)
Two-component response regulator n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89PC3_BRADU
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:BAR60802.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
SCNpilot_cont_750_bf_scaffold_1274_5
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1911..2315
DNA (405bp) protein (135aa)
Blr3560 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89PC2_BRADU
hypothetical protein
Blr3560 protein {ECO:0000313|EMBL:BAC48825.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_750_bf_scaffold_1274_6
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2540..2770
DNA (231bp) protein (77aa)
UPI0003CEA36C related cluster n=1 Tax=unknown RepID=UPI0003CEA36C
ATPase associated with various cellular activities family protein {ECO:0000313|EMBL:AID34374.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
ATPase of the AAA+ class
SCNpilot_cont_750_bf_scaffold_1274_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2783..3103
DNA (321bp) protein (107aa)
Type VII secretion-associated serine protease mycosin {ECO:0000313|EMBL:KEZ19477.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_750_bf_scaffold_1274_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3107..4018
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MRQ4_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_750_bf_scaffold_1274_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5467..6054)
DNA (588bp) protein (196aa)
protocatechuate 3,4-dioxygenase alpha chain; K00448 protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
Protocatechuate 3,4-dioxygenase, alpha subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6X3_9BRAD
Protocatechuate 3,4-dioxygenase, alpha subunit {ECO:0000313|EMBL:EKS36504.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_750_bf_scaffold_1274_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6044..6751)
DNA (708bp) protein (236aa)
pcaH; protocatechuate 3,4-dioxygenase subunit beta; K00449 protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
Protocatechuate 3,4-dioxygenase, beta subunit n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2T5_9BRAD rbh
Protocatechuate 3,4-dioxygenase, beta subunit {ECO:0000313|EMBL:EKS35751.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_750_bf_scaffold_1274_11
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6742..8262)
DNA (1521bp) protein (507aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] rbh
Aldehyde dehydrogenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MTZ1_9RHIZ rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EKF20867.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCNpilot_cont_750_bf_scaffold_1274_12
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8303..9475)
DNA (1173bp) protein (391aa)
4-hydroxybenzoate 3-monooxygenase; K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
4-hydroxybenzoate hydroxylase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HX00_AZOC5
4-hydroxybenzoate hydroxylase {ECO:0000313|EMBL:BAF87444.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_750_bf_scaffold_1274_13
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9721..10626)
DNA (906bp) protein (302aa)
LysR-family transcriptional regulator n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V8N8_9RHOB rbh
LysR-family transcriptional regulator {ECO:0000313|EMBL:EAQ05469.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldensis SKA53.;"
LysR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1274_14
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10737..11528
DNA (792bp) protein (264aa)
3-alpha-hydroxysteroid dehydrogenase {ECO:0000313|EMBL:EAQ05468.1}; EC=1.1.1.50 {ECO:0000313|EMBL:EAQ05468.1};; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldensis SKA53.;"
3-alpha-hydroxysteroid dehydrogenase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V8N7_9RHOB
3-alpha-hydroxysteroid dehydrogenase
SCNpilot_cont_750_bf_scaffold_1274_15
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11539..13359
DNA (1821bp) protein (607aa)
Cytochrome P450 n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V8N6_9RHOB rbh
ferredoxin rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCNpilot_cont_750_bf_scaffold_1274_16
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13700..14707)
DNA (1008bp) protein (336aa)
LysR substrate binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZWA3_9PROT
LysR substrate binding domain protein {ECO:0000313|EMBL:EHM02746.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
pcaQ; transcriptional regulator; K02623 LysR family transcriptional regulator, pca operon transcriptional activator
SCNpilot_cont_750_bf_scaffold_1274_17
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14846..15748
DNA (903bp) protein (301aa)
arylsulfatase (EC:3.1.6.1)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036AEAB3
ElaC protein {ECO:0000313|EMBL:BAQ46681.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCNpilot_cont_750_bf_scaffold_1274_18
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15780..16757
DNA (978bp) protein (326aa)
ABC taurine transporter, periplasmic ligand binding protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAN1_9RHOB
ABC taurine transporter, periplasmic ligand binding protein {ECO:0000313|EMBL:EAQ14972.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
hypothetical protein; K02051 NitT/TauT family transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_1274_19
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16754..17620
DNA (867bp) protein (289aa)
ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, ATPase component-like protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAN2_9RHOB
ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, ATPase component-like protein {ECO:0000313|EMBL:EAQ14973.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_1274_20
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17667..18473
DNA (807bp) protein (269aa)
Putative taurine ABC transport system permease protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAN0_9RHOB
Putative taurine ABC transport system permease protein {ECO:0000313|EMBL:EAQ14971.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
binding-protein-dependent transport system inner membrane protein
SCNpilot_cont_750_bf_scaffold_1274_21
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18470..19219
DNA (750bp) protein (250aa)
Putative ABC transporter membrane protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAM9_9RHOB
Putative ABC transporter membrane protein {ECO:0000313|EMBL:EAQ14970.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
ABC transporter permease
SCNpilot_cont_750_bf_scaffold_1274_22
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19454..20134)
DNA (681bp) protein (227aa)
Transcriptional regulator n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W435_MAGSA
Transcriptional regulator TetR family {ECO:0000313|EMBL:KIL99025.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1274_23
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20276..21472)
DNA (1197bp) protein (399aa)
Substrate-binding protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IFE7_METNO rbh
substrate-binding protein rbh
Substrate-binding protein {ECO:0000313|EMBL:ACL57682.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
Displaying 23 items

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