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SCNpilot_cont_750_bf_scaffold_1277

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1277_1
Mesorhizobium sp. LSJC265A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..145
DNA (144bp) protein (48aa)
UPI0003CEA9A8 related cluster n=1 Tax=unknown RepID=UPI0003CEA9A8
Hemolysin {ECO:0000313|EMBL:ESX10467.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1277_2
unknown

Not on your lists

comp(479..589)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1277_3
unknown

Not on your lists

comp(706..1332)
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1277_4
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1359..1796)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YXC3_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KHJ53711.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
BadM/Rrf2 family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1277_5
unknown

Not on your lists

1944..2072
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1277_6
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2062..2967
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003641615 rbh
Thioredoxin reductase {ECO:0000313|EMBL:KHJ53712.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
SCNpilot_cont_750_bf_scaffold_1277_7
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2964..3650
DNA (687bp) protein (229aa)
methyltransferase type 11; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] rbh
Uncharacterized protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X3E7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI15319.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
SCNpilot_cont_750_bf_scaffold_1277_8
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3766..4455
DNA (690bp) protein (230aa)
methyltransferase type 11; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
Uncharacterized protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X3E7_9RHIZ
Methyltransferase {ECO:0000313|EMBL:EWY40845.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SCNpilot_cont_750_bf_scaffold_1277_9
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4733..5626
DNA (894bp) protein (298aa)
Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV74_CAUSK
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABZ72964.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_750_bf_scaffold_1277_10
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5667..5906)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCZ4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:ETR77818.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1277_11
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5906..7129)
DNA (1224bp) protein (408aa)
Conjugal transfer protein TrbI n=1 Tax=Sphingomonas sp. LH128 RepID=J8VWE4_9SPHN rbh
Conjugal transfer protein TrbI {ECO:0000313|EMBL:EJU15035.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
trbI; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10
SCNpilot_cont_750_bf_scaffold_1277_12
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7126..8775)
DNA (1650bp) protein (550aa)
Conjugal transfer protein TrbG n=1 Tax=Aeromonas caviae RepID=Q68E30_AERCA rbh
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KHJ55158.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
trbG; conjugal transfer protein TrbG; K03204 type IV secretion system protein VirB9
SCNpilot_cont_750_bf_scaffold_1277_13
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8775..10130)
DNA (1356bp) protein (452aa)
conjugal transfer protein TrbL n=1 Tax=Hoeflea sp. 108 RepID=UPI00037834B4
Conjugal transfer protein TrbL {ECO:0000313|EMBL:KEZ17847.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
SCNpilot_cont_750_bf_scaffold_1277_14
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10135..10524)
DNA (390bp) protein (130aa)
Conjugal transfer protein TrbK n=1 Tax=Sphingomonas sp. LH128 RepID=J8W5P6_9SPHN
Conjugal transfer protein TrbK {ECO:0000313|EMBL:KEQ52090.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
trbK; conjugal transfer protein TrbK
SCNpilot_cont_750_bf_scaffold_1277_15
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10535..11305)
DNA (771bp) protein (257aa)
conjugal transfer protein TrbJ n=1 Tax=Hoeflea sp. 108 RepID=UPI00036FDECC rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KEQ52091.1}; Flags: Precursor;; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
conjugal transfer protein TrbJ rbh
SCNpilot_cont_750_bf_scaffold_1277_16
bacterium YEK0313, Bacteria

Not on your lists

comp(11302..12378)
DNA (1077bp) protein (359aa)
conjugal transfer protein TrbE n=1 Tax=Hoeflea sp. 108 RepID=UPI000370FFC0
Type IV secretion system protein virB4 {ECO:0000313|EMBL:CEJ11239.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4
SCNpilot_cont_750_bf_scaffold_1277_17
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12423..13712)
DNA (1290bp) protein (430aa)
conjugal transfer protein TrbE n=1 Tax=Hoeflea sp. 108 RepID=UPI000370FFC0
Conjugal transfer ATPase TrbE {ECO:0000313|EMBL:EJU15029.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
trbE; conjugal transfer protein TrbE; K03199 type IV secretion system protein VirB4
SCNpilot_cont_750_bf_scaffold_1277_18
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13725..14006)
DNA (282bp) protein (94aa)
Conjugal transfer protein TrbB n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3V9_9SPHN
Conjugal transfer protein TrbB {ECO:0000313|EMBL:EJU15028.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
conjugal transfer protein TrbB; K03198 type IV secretion system protein VirB3
SCNpilot_cont_750_bf_scaffold_1277_19
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14006..14338)
DNA (333bp) protein (111aa)
Conjugal transfer protein TrbC n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQK9_9SPHN
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KEQ52094.1}; Flags: Precursor;; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
trbC; conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
SCNpilot_cont_750_bf_scaffold_1277_20
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14335..15318)
DNA (984bp) protein (328aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Sphingomonas sp. LH128 RepID=J8W5P2_9SPHN rbh
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:KEZ17841.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
SCNpilot_cont_750_bf_scaffold_1277_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15488..15922)
DNA (435bp) protein (145aa)
CopG family transcripitonal regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI0003822539
CopG family transcriptional regulator {ECO:0000313|EMBL:KIZ36758.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1277_22
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15932..17917)
DNA (1986bp) protein (662aa)
TRAG family protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F262_9RHIZ rbh
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:KEZ17839.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
SCNpilot_cont_750_bf_scaffold_1277_23
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17943..19682)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3V6_9SPHN
Type VI secretion protein {ECO:0000313|EMBL:KEZ17838.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1277_24
bacterium YEK0313, Bacteria

Not on your lists

comp(19927..20688)
DNA (762bp) protein (254aa)
Lytic transglycosylase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQK4_9SPHN
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:CEJ11246.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
lytic transglycosylase
SCNpilot_cont_750_bf_scaffold_1277_25
bacterium YEK0313, Bacteria

Not on your lists

comp(20692..21039)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8W5N8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CEJ11247.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1277_26
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21086..21631)
DNA (546bp) protein (182aa)
Conjugal transfer protein TraF n=2 Tax=Sphingobium RepID=D4Z954_SPHJU
Peptidase S26 {ECO:0000313|EMBL:KEZ17835.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
traF; conjugal transfer protein TraF
SCNpilot_cont_750_bf_scaffold_1277_27
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21628..22149)
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4Z955_SPHJU
Glycosidase {ECO:0000313|EMBL:KHJ55173.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1277_28
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22146..22400)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4Z956_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:KEQ52107.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1277_29
bacterium YEK0313, Bacteria

Not on your lists

comp(22397..23035)
DNA (639bp) protein (213aa)
ParA-like protein n=2 Tax=Sphingobium RepID=D4Z957_SPHJU rbh
Chromosome-partitioning ATPase Soj {ECO:0000313|EMBL:CEJ11251.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ParA-like protein; K03496 chromosome partitioning protein rbh
SCNpilot_cont_750_bf_scaffold_1277_30
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23163..23960)
DNA (798bp) protein (266aa)
RepA replication protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0JAN9_9SPHN
RepA replication protein {ECO:0000313|EMBL:KHJ55176.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
repA; replication protein A
Displaying items 1-30 of 63 in total

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