ggKbase home page

SCNpilot_cont_750_bf_scaffold_1357

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1357_1
unknown

Not on your lists

comp(2..178)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1357_2
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

686..2062
DNA (1377bp) protein (459aa)
Kynurenine 3-monooxygenase {ECO:0000256|HAMAP-Rule:MF_01971}; EC=1.14.13.9 {ECO:0000256|HAMAP-Rule:MF_01971};; Kynurenine 3-hydroxylase {ECO:0000256|HAMAP-Rule:MF_01971}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
kynurenine 3-monooxygenase n=1 Tax=Dyella japonica RepID=UPI0003155B07
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase
SCNpilot_cont_750_bf_scaffold_1357_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2055..2462
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP90_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01282.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Protein of unknown function (DUF3293)
SCNpilot_cont_750_bf_scaffold_1357_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2504..3709)
DNA (1206bp) protein (402aa)
General secretion pathway protein F n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ1_9GAMM rbh
General secretion pathway protein F {ECO:0000313|EMBL:EIL88492.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
general secretion pathway protein F; K02455 general secretion pathway protein F rbh
SCNpilot_cont_750_bf_scaffold_1357_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3714..4361)
DNA (648bp) protein (216aa)
Type II secretion system protein E n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ2_9GAMM
Type II secretion system protein E {ECO:0000313|EMBL:EIL88493.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
type II secretion system protein E; K02454 general secretion pathway protein E
SCNpilot_cont_750_bf_scaffold_1357_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4358..5113)
DNA (756bp) protein (252aa)
Type II secretion system protein E n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ2_9GAMM
Type II secretion system protein E {ECO:0000313|EMBL:EIL88493.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
type II secretion system protein E; K02454 general secretion pathway protein E
SCNpilot_cont_750_bf_scaffold_1357_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5121..7217)
DNA (2097bp) protein (699aa)
Type II and III secretion system protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ3_9GAMM rbh
Type II and III secretion system protein {ECO:0000313|EMBL:EIL88494.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
type II and III secretion system protein; K02453 general secretion pathway protein D rbh
SCNpilot_cont_750_bf_scaffold_1357_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7252..7719)
DNA (468bp) protein (156aa)
Putative general secretion pathway related transmembrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ4_9GAMM
Putative general secretion pathway related transmembrane protein {ECO:0000313|EMBL:EIL88495.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative general secretion pathway related transmembrane protein; K02452 general secretion pathway protein C
SCNpilot_cont_750_bf_scaffold_1357_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7800..8597)
DNA (798bp) protein (266aa)
General secretory pathway protein N n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ5_9GAMM rbh
General secretory pathway protein N {ECO:0000313|EMBL:EIL88496.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
gspN; general secretion pathway protein N; K02463 general secretion pathway protein N
SCNpilot_cont_750_bf_scaffold_1357_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8594..9082)
DNA (489bp) protein (163aa)
General secretion pathway M protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ6_9GAMM
General secretion pathway M protein {ECO:0000313|EMBL:EIL88497.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
general secretion pathway M protein; K02462 general secretion pathway protein M
SCNpilot_cont_750_bf_scaffold_1357_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9079..10290)
DNA (1212bp) protein (404aa)
Type II secretion system protein L n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ7_9GAMM rbh
General secretion pathway L {ECO:0000313|EMBL:EIL88498.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
general secretion pathway L; K02461 general secretion pathway protein L
SCNpilot_cont_750_bf_scaffold_1357_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10287..11207)
DNA (921bp) protein (307aa)
Type II secretion system protein K n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ8_9GAMM rbh
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
general secretion pathway protein K; K02460 general secretion pathway protein K rbh
SCNpilot_cont_750_bf_scaffold_1357_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11204..11803)
DNA (600bp) protein (200aa)
General secretion pathway protein J n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ9_9GAMM
General secretion pathway protein J {ECO:0000313|EMBL:EIL88500.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
general secretion pathway protein J; K02459 general secretion pathway protein J
SCNpilot_cont_750_bf_scaffold_1357_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11800..12195)
DNA (396bp) protein (132aa)
General secretion pathway protein I n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMR0_9GAMM
General secretion pathway protein I {ECO:0000313|EMBL:EIL88501.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
general secretion pathway protein I; K02458 general secretion pathway protein I
SCNpilot_cont_750_bf_scaffold_1357_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12173..12691)
DNA (519bp) protein (173aa)
General secretion pathway protein H n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMR1_9GAMM
General secretion pathway protein H {ECO:0000313|EMBL:EIL88502.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
general secretion pathway protein H; K02457 general secretion pathway protein H
SCNpilot_cont_750_bf_scaffold_1357_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12706..13140)
DNA (435bp) protein (145aa)
General secretion pathway protein G n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMR2_9GAMM
General secretion pathway protein G {ECO:0000313|EMBL:EIL88503.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
gspG; general secretory pathway protein g, type II secretion system; K02456 general secretion pathway protein G
SCNpilot_cont_750_bf_scaffold_1357_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13640..15238
DNA (1599bp) protein (533aa)
Lipoprotein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMR3_9GAMM rbh
Lipoprotein {ECO:0000313|EMBL:EIL88504.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
lipoprotein
SCNpilot_cont_750_bf_scaffold_1357_18
unknown

Not on your lists

comp(15046..15552)
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1357_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15672..16307
DNA (636bp) protein (212aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Cytochrome c biogenesis protein CcmA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP89_9GAMM rbh
heme ABC exporter, ATP-binding protein CcmA rbh
SCNpilot_cont_750_bf_scaffold_1357_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16365..16730
DNA (366bp) protein (122aa)
Heme exporter protein B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP88_9GAMM
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
heme exporter protein CcmB
Displaying 20 items

View Taxonomy