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SCNpilot_cont_750_bf_scaffold_1368

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1368_1
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

248..1525
DNA (1278bp) protein (426aa)
codA; cytosine deaminase (EC:3.5.4.1) rbh
Cytosine deaminase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EU73_MODMB rbh
Uncharacterized protein {ECO:0000313|EMBL:AHH97350.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
SCNpilot_cont_750_bf_scaffold_1368_2
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1497..1988)
DNA (492bp) protein (164aa)
Conserved putative secreted protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PB34_9DELT
Conserved putative secreted protein {ECO:0000313|EMBL:EPX59482.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1368_3
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1978..2736)
DNA (759bp) protein (253aa)
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase (EC:2.3.1.61); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase {ECO:0000313|EMBL:ACU70750.1}; EC=2.3.1.61 {ECO:0000313|EMBL:ACU70750.1};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QD40_CATAD
SCNpilot_cont_750_bf_scaffold_1368_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2767..2904)
DNA (138bp) protein (46aa)
Amidohydrolase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Z6_VARPS
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ACS22624.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_750_bf_scaffold_1368_5
unknown

Not on your lists

3153..3377
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1368_6
Geobacillus kaustophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4132..5616)
DNA (1485bp) protein (495aa)
Glycine betaine aldehyde dehydrogenase n=1 Tax=Geobacillus kaustophilus (strain HTA426) RepID=Q5QL36_GEOKA rbh
glycine betaine aldehyde dehydrogenase rbh
Glycine betaine aldehyde dehydrogenase {ECO:0000313|EMBL:BAD74274.1}; TaxID=235909 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus kaustophilus (strain HTA426).;"
SCNpilot_cont_750_bf_scaffold_1368_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6021..7019
DNA (999bp) protein (333aa)
Isochorismatase hydrolase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Y1_VARPS
isochorismatase hydrolase
Tax=RBG_16_Actinobacteria_68_12_curated
SCNpilot_cont_750_bf_scaffold_1368_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7158..8312
DNA (1155bp) protein (385aa)
Muconate cycloisomerase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FP4_MESSB
mandelate racemase/muconate lactonizing-like protein
Tax=RBG_16_Actinobacteria_68_12_curated
SCNpilot_cont_750_bf_scaffold_1368_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8309..9382
DNA (1074bp) protein (358aa)
NAD/NADP octopine/nopaline dehydrogenase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Y9_VARPS
NAD/NADP octopine/nopaline dehydrogenase
NAD/NADP octopine/nopaline dehydrogenase {ECO:0000313|EMBL:ACS22617.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_750_bf_scaffold_1368_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9459..10358
DNA (900bp) protein (300aa)
serine carboxypeptidase n=1 Tax=Hoeflea sp. 108 RepID=UPI000375D327
Shikimate/quinate 5-dehydrogenase {ECO:0000313|EMBL:EYR81098.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Shikimate/quinate 5-dehydrogenase; K06410 dipicolinate synthase subunit A
SCNpilot_cont_750_bf_scaffold_1368_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10348..11715
DNA (1368bp) protein (456aa)
Allantoinase AllB {ECO:0000313|EMBL:EYR81099.1}; EC=3.5.2.5 {ECO:0000313|EMBL:EYR81099.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
amidohydrolase; K01464 dihydropyrimidinase [EC:3.5.2.2]
Allantoinase AllB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYW7_9RHIZ
SCNpilot_cont_750_bf_scaffold_1368_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11737..12501)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00035CB588
putative short-chain dehydrogenase/reductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_750_bf_scaffold_1368_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12579..13328)
DNA (750bp) protein (250aa)
3alpha(Or 20beta)-hydroxysteroid dehydrogenase n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SXX1_AMYOR
3alpha(or 20beta)-hydroxysteroid dehydrogenase
Tax=RBG_16_Actinobacteria_68_12_curated
SCNpilot_cont_750_bf_scaffold_1368_14
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13396..14184)
DNA (789bp) protein (263aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
xylose isomerase domain-containing protein; K01816 hydroxypyruvate isomerase [EC:5.3.1.22]
Hydroxypyruvate isomerase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLI0_9FIRM
SCNpilot_cont_750_bf_scaffold_1368_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14436..15401
DNA (966bp) protein (322aa)
naphthoate synthase; K01661 naphthoate synthase [EC:4.1.3.36] rbh
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Naphthoate synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAI6_NAKMY rbh
SCNpilot_cont_750_bf_scaffold_1368_16
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15484..16818
DNA (1335bp) protein (445aa)
AMP-dependent synthetase and ligase; K01911 O-succinylbenzoic acid--CoA ligase [EC:6.2.1.26]
AMP-dependent synthetase and ligase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H186_CELFA
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:AEE45057.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_750_bf_scaffold_1368_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16830..17723
DNA (894bp) protein (298aa)
1,4-dihydroxy-2-naphthoateoctaprenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-] rbh
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
1,4-dihydroxy-2-naphthoateoctaprenyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAI3_NAKMY rbh
SCNpilot_cont_750_bf_scaffold_1368_18
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17823..18221)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAH7_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV77342.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying 18 items

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