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SCNpilot_cont_750_bf_scaffold_1401

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1401_1
Candidatus Synechococcus spongiarum, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(195..1823)
DNA (1629bp) protein (543aa)
Uncharacterized protein {ECO:0000313|EMBL:KKZ11644.1}; Flags: Fragment;; TaxID=1604020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Candidatus Synechococcus spongiarum SP3.;"
DNA methyltransferase id=2914043 bin=GWF2_Geobacter_54_21 species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
DNA methyltransferase
SCNpilot_cont_750_bf_scaffold_1401_2
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1856..2956)
DNA (1101bp) protein (367aa)
Methylase n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7L3F2_METC4
Methylase {ECO:0000313|EMBL:KGE80198.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
methylase
SCNpilot_cont_750_bf_scaffold_1401_3
unknown

Not on your lists

comp(3030..3251)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1401_4
unknown

Not on your lists

comp(3255..3395)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1401_5
unknown

Not on your lists

3500..3700
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1401_6
unknown

Not on your lists

comp(3830..4120)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1401_7
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4117..4797)
DNA (681bp) protein (227aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
muraminidase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D9C9E8
phage related lysozyme
SCNpilot_cont_750_bf_scaffold_1401_8
unknown

Not on your lists

comp(4873..5001)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1401_9
Silicibacter phage DSS3phi2, N4likevirus, Caudovirales, Viruses

Not on your lists

comp(4991..5326)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Silicibacter phage DSS3phi2 RepID=C4NT75_9CAUD
Putative uncharacterized protein {ECO:0000313|EMBL:ACL81341.1}; TaxID=490912 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae; N4likevirus; unclassified N4likevirus.;" source="Silicibacter phage DSS3phi2.;"
SCNpilot_cont_750_bf_scaffold_1401_10
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5381..6121)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6G7_POLGS
Ribonuclease III {ECO:0000313|EMBL:KGJ23511.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1401_11
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6132..10055)
DNA (3924bp) protein (1308aa)
gene transfer agent (GTA) n=1 Tax=Loktanella vestfoldensis RepID=UPI000364D211
Uncharacterized protein {ECO:0000313|EMBL:AJE46636.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1401_12
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10059..10508)
DNA (450bp) protein (150aa)
Putative phage cell wall peptidase, NlpC/P60 family n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SC48_9RHOB
Putative phage cell wall peptidase, NlpC/P60 family {ECO:0000313|EMBL:EPX87685.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
phage cell wall peptidase, NlpC/P60 family
SCNpilot_cont_750_bf_scaffold_1401_13
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10520..11404)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SMQ1_9RHOB
Beta tubulin, autoregulation binding site {ECO:0000313|EMBL:KGJ16547.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
NlpC/P60 family phage cell wall peptidase
SCNpilot_cont_750_bf_scaffold_1401_14
Rhizobium phage 16-3, Caudovirales, Viruses

Not on your lists

comp(11429..13039)
DNA (1611bp) protein (537aa)
p023 n=1 Tax=Rhizobium phage 16-3 RepID=B4UTR2_BP163 rbh
p023 {ECO:0000313|EMBL:ABH04446.1}; TaxID=10704 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Rhizobium phage 16-3 (Bacteriophage 16-3).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1401_15
Pelagibacter phage HTVC008M, Caudovirales, Viruses

Not on your lists

comp(13041..13598)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Pelagibacter phage HTVC008M RepID=M1HLS3_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGE60398.1}; TaxID=1283076 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pelagibacter phage HTVC008M.;"
SCNpilot_cont_750_bf_scaffold_1401_16
unknown

Not on your lists

comp(13600..13908)
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying 16 items

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