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SCNpilot_cont_750_bf_scaffold_1452

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1452_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1646
DNA (1644bp) protein (548aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hppA; membrane-bound proton-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PDH5_9BRAD
SCNpilot_cont_750_bf_scaffold_1452_2
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1859..2251)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TLN5_9BRAD
SmpA/OmlA
Uncharacterized protein {ECO:0000313|EMBL:CCE07373.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
SCNpilot_cont_750_bf_scaffold_1452_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2439..2981
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PC51_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38294.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1452_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3032..3613
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214G3_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD88223.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_bf_scaffold_1452_5
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3919..4980
DNA (1062bp) protein (354aa)
glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15]
Phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; EC=2.3.1.n2 {ECO:0000255|HAMAP-Rule:MF_00019};; Acyl-ACP phosphotransacylase {ECO:0000255|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;
Phosphate acyltransferase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=PLSX_NITWN
SCNpilot_cont_750_bf_scaffold_1452_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4977..5954
DNA (978bp) protein (326aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] rbh
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMZ0_NITHX rbh
SCNpilot_cont_750_bf_scaffold_1452_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6085..6420
DNA (336bp) protein (112aa)
transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI00035D68E2
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000255|HAMAP-Rule:MF_00380}; Short=IHF-alpha {ECO:0000255|HAMAP-Rule:MF_00380};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1452_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6545..7216
DNA (672bp) protein (224aa)
Transcriptional regulator, MerR family n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IWQ6_RHOP2
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABD07354.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_1452_9
unknown

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7303..7437
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1452_10
unknown

Not on your lists

comp(7825..8064)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1452_11
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8154..8753
DNA (600bp) protein (200aa)
Putative lipoprotein n=1 Tax=Pectobacterium carotovorum subsp. carotovorum (strain PC1) RepID=C6DDE2_PECCP
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ACT14349.1}; Flags: Precursor;; TaxID=561230 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum (strain PC1).;"
SCNpilot_cont_750_bf_scaffold_1452_12
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8874..9104
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YJB1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KHJ56261.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1452_13
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9205..10173
DNA (969bp) protein (323aa)
Putative short-chain dehydrogenase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z7M9_9BRAD
putative short-chain dehydrogenase
Putative short-chain dehydrogenase {ECO:0000313|EMBL:BAM89342.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_750_bf_scaffold_1452_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10244..11149)
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium radiobacter RepID=UPI00037DBD5D
LysR family transcriptional regulator {ECO:0000313|EMBL:KDR87766.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
LysR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1452_15
bacterium YEK0313, Bacteria

Not on your lists

11286..12059
DNA (774bp) protein (258aa)
Short chain dehydrogenase family protein 10 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HWK8_ACHXA rbh
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:CEJ13428.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
short chain dehydrogenase rbh
SCNpilot_cont_750_bf_scaffold_1452_16
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12204..13007
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QU63_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:AHY50062.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1452_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13146..14330
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9A4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37379.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
saccharopine dehydrogenase
SCNpilot_cont_750_bf_scaffold_1452_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14447..15745)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKJ0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63257.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1452_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15803..17308)
DNA (1506bp) protein (502aa)
Sugar transferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKJ1_NITHX
sugar transferase
Sugar transferase {ECO:0000313|EMBL:ABE63256.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1452_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17455..18588)
DNA (1134bp) protein (378aa)
Glycosyl transferase, group 1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKJ2_NITHX
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABE63255.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1452_21
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18592..19281)
DNA (690bp) protein (230aa)
Blr0835 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89W58_BRADU
polysaccharide export protein; K01991 polysaccharide export outer membrane protein
Putative polysaccharide export protein {ECO:0000313|EMBL:KGJ65275.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
Displaying 21 items

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