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SCNpilot_cont_750_bf_scaffold_1565

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1565_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..518
DNA (516bp) protein (172aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRF2_9GAMM rbh
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EIM02044.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Fe2+/Zn2+ uptake regulation protein rbh
SCNpilot_cont_750_bf_scaffold_1565_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

614..1045
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK24_9GAMM
MerC mercury resistance protein
Uncharacterized protein {ECO:0000313|EMBL:EIL87565.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_750_bf_scaffold_1565_3
unknown

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1139..1228
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1565_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1378..1713
DNA (336bp) protein (112aa)
TrpR-related protein YerC/YecD n=1 Tax=Rhodanobacter denitrificans RepID=I4WLG7_9GAMM
TrpR-related protein YerC/YecD
TrpR-related protein YerC/YecD {ECO:0000313|EMBL:AGG88514.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1565_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1710..2516
DNA (807bp) protein (269aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ATP phosphoribosyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK20_9GAMM
ATP phosphoribosyltransferase
SCNpilot_cont_750_bf_scaffold_1565_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2530..3828
DNA (1299bp) protein (433aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Histidinol dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLB7_9GAMM rbh
histidinol dehydrogenase rbh
SCNpilot_cont_750_bf_scaffold_1565_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3825..4955
DNA (1131bp) protein (377aa)
histidinol phosphate aminotransferase apoenzyme (EC:2.6.1.9) rbh
Histidinol-phosphate aminotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRG2_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_1565_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4952..6019
DNA (1068bp) protein (356aa)
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19) rbh
Imidazole glycerol-phosphate dehydratase/histidinol phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLH1_9GAMM rbh
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1565_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6019..6609
DNA (591bp) protein (197aa)
imidazole glycerol phosphate synthase subunit hisH (EC:2.4.2.-) rbh
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrifica
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Rhodanobacter denitrificans RepID=I4WLH2_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_1565_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6606..7334
DNA (729bp) protein (243aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.
1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase (EC:5.3.1.16) rbh
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRG5_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_1565_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7328..8098
DNA (771bp) protein (257aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
imidazole glycerol phosphate synthase subunit hisF (EC:4.1.3.-) rbh
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Rhodanobacter denitrificans RepID=I4WLH4_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_1565_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8122..8751
DNA (630bp) protein (210aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.6.1.31 3.5.4.19) rbh
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Rhodanobacter denitrificans RepID=I4WLH5_9GAMM rbh
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1565_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8776..9525)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK10_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL87551.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1565_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9792..10502
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6A1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94992.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1565_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10499..10906
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6A2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94993.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1565_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10919..11926)
DNA (1008bp) protein (336aa)
Peptidase C13 family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRG8_9GAMM
Peptidase C13 family protein {ECO:0000313|EMBL:EIM02060.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Peptidase C13 family
SCNpilot_cont_750_bf_scaffold_1565_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11928..12620)
DNA (693bp) protein (231aa)
Enolase-phosphatase E1 {ECO:0000256|HAMAP-Rule:MF_01681}; EC=3.1.3.77 {ECO:0000256|HAMAP-Rule:MF_01681};; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000256|HAMAP-Rule:MF_01681}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Enolase-phosphatase E1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6A6_9GAMM
acireductone synthase
SCNpilot_cont_750_bf_scaffold_1565_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12670..13062)
DNA (393bp) protein (131aa)
Acireductone dioxygenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRH0_9GAMM
Acireductone dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00009702}; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00090345}; Acireductone dioxygenase (Fe(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; Acireductone dioxygenase (Ni(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
hypothetical protein, contains double-stranded beta-helix domain
SCNpilot_cont_750_bf_scaffold_1565_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13130..13780)
DNA (651bp) protein (217aa)
Methylthioribulose-1-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_01677}; Short=MTRu-1-P dehydratase {ECO:0000256|HAMAP-Rule:MF_01677};; EC=4.2.1.109 {ECO:0000256|HAMAP-Rule:MF_01677};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
methylthioribulose-1-phosphate dehydratase (EC:4.2.1.109)
Methylthioribulose-1-phosphate dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLI2_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_1565_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13948..14277
DNA (330bp) protein (110aa)
High potential iron-sulfur protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRH2_9GAMM
High potential iron-sulfur protein {ECO:0000313|EMBL:EIM02064.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
High potential iron-sulfur protein
SCNpilot_cont_750_bf_scaffold_1565_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14625..15242)
DNA (618bp) protein (206aa)
Cationic amino acid transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6B0_9GAMM
Cationic amino acid transporter {ECO:0000313|EMBL:EIL95001.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amino acid-polyamine-organocation (apc) superfamily transporter; K03294 basic amino acid/polyamine antiporter, APA family
Displaying 21 items

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