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SCNpilot_cont_750_bf_scaffold_1677

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1677_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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82..1206
DNA (1125bp) protein (375aa)
Mandelate racemase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D9Y9_BRAJP
mandelate racemase
Mandelate racemase {ECO:0000313|EMBL:BAL12845.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_750_bf_scaffold_1677_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1210..2817
DNA (1608bp) protein (536aa)
choline dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003782C9A
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ABD08755.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_1677_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2835..3557
DNA (723bp) protein (241aa)
GntR family transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F488ED
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABD08756.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_1677_4
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3798..5027
DNA (1230bp) protein (410aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FE2_MESSB rbh
twin-arginine translocation pathway signal; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABG63883.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_bf_scaffold_1677_5
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5049..5921
DNA (873bp) protein (291aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FE3_MESSB
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABG63882.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_bf_scaffold_1677_6
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5918..6856
DNA (939bp) protein (313aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FE4_MESSB rbh
inner-membrane translocator rbh
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ABG63881.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_bf_scaffold_1677_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6853..7581
DNA (729bp) protein (243aa)
High-affinity branched-chain amino acid transport ATP-binding protein BraF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWR2_9RHIZ rbh
ABC-type branched-chain amino acid transport system ATPase component {ECO:0000313|EMBL:EYR83619.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
branched-chain amino acid transport ATP-binding protein LivG; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_1677_8
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7574..8293
DNA (720bp) protein (240aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FE6_MESSB rbh
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein rbh
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABG63879.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_bf_scaffold_1677_9
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8309..9760
DNA (1452bp) protein (484aa)
Vanillin dehydrogenase {ECO:0000313|EMBL:ABG63878.1}; EC=1.2.1.67 {ECO:0000313|EMBL:ABG63878.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Vanillin dehydrogenase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FE7_MESSB
aldehyde dehydrogenase
SCNpilot_cont_750_bf_scaffold_1677_10
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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9771..10454
DNA (684bp) protein (228aa)
UPI0003D03370 related cluster n=1 Tax=unknown RepID=UPI0003D03370
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Actinobacteria_64_13_curated
SCNpilot_cont_750_bf_scaffold_1677_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10461..10994)
DNA (534bp) protein (178aa)
Cupin domain-containing protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C6V3_9RHIZ rbh
Cupin domain-containing protein {ECO:0000313|EMBL:EYR83624.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
2,4'-dihydroxyacetophenone dioxygenase rbh
SCNpilot_cont_750_bf_scaffold_1677_12
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11112..11993
DNA (882bp) protein (294aa)
Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FF3_MESSB rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABG63872.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_bf_scaffold_1677_13
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12159..12824)
DNA (666bp) protein (222aa)
Putative transcriptional regulatory protein (Nitrogen assimilation control protein) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EL02_BRASB
transcriptional regulator
Putative transcriptional regulatory protein (Nitrogen assimilation control protein) {ECO:0000313|EMBL:ABQ36846.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Displaying 13 items

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