name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_750_bf_scaffold_1723_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..1181)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NV10_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53307.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
virD4; type IV secretion protein VirD4; K03205 type IV secretion system protein VirD4
|
|
SCNpilot_cont_750_bf_scaffold_1723_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1159..2217)
|
Type II secretion system protein E n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH6_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53308.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
type II secretion system protein E; K03196 type IV secretion system protein VirB11
|
|
SCNpilot_cont_750_bf_scaffold_1723_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2180..3526)
|
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK51_OLICO
Conjugal transfer protein {ECO:0000313|EMBL:KIZ46690.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
virB10; type IV secretion protein VirB10; K03195 type IV secretion system protein VirB10
|
|
SCNpilot_cont_750_bf_scaffold_1723_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3529..4332)
|
P-type conjugative transfer protein VirB9 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK50_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53118.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
virB9; type IV secretion protein VirB9; K03204 type IV secretion system protein VirB9
|
|
SCNpilot_cont_750_bf_scaffold_1723_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4329..5045)
|
Type IV secretion protein VirB8 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK49_OLICO
rbh
virulence protein; K03203 type IV secretion system protein VirB8
rbh
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53117.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
|
|
SCNpilot_cont_750_bf_scaffold_1723_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5042..6172)
|
TrbL/VirB6 plasmid conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK48_OLICO
Conjugal transfer protein TrbL {ECO:0000313|EMBL:KIZ46692.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
virB6; type IV secretion protein VirB6; K03201 type IV secretion system protein VirB6
|
|
SCNpilot_cont_750_bf_scaffold_1723_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6181..6375)
|
Putative lipoprotein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JK47_OLICO
lipoprotein
Lipoprotein {ECO:0000313|EMBL:KIZ46693.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
|
|
SCNpilot_cont_750_bf_scaffold_1723_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6572..8122)
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK44_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig132, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53812.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_1723_9
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8119..10530)
|
Type IV secretion protein VirB4 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK43_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig132, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53813.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
type IV secretion/conjugal transfer ATPase; K03199 type IV secretion system protein VirB4
|
|
SCNpilot_cont_750_bf_scaffold_1723_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10539..10835)
|
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK42_OLICO
virB3; type IV secretion protein VirB3; K03198 type IV secretion system protein VirB3
Type IV secretion protein VirB3 {ECO:0000313|EMBL:AEI08316.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_750_bf_scaffold_1723_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10832..11161)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N8F8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26852.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
conjugal transfer protein, trbC; K03197 type IV secretion system protein VirB2
|
|
SCNpilot_cont_750_bf_scaffold_1723_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11151..11885)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKX6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26853.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative lytic transglycosylase
|
|
SCNpilot_cont_750_bf_scaffold_1723_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11987..12487
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEQ2_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26854.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_1723_14
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12489..13103
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BR76_OLICM
Bradyrhizobium elkanii strain UASWS1015 Contig134, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53752.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_1723_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13100..13438
|
Single-stranded DNA-binding protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8ND73_AFIFE
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative single-stranded DNA-binding protein
|
|
SCNpilot_cont_750_bf_scaffold_1723_16
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13425..14015
|
Nuclease n=2 Tax=Oligotropha carboxidovorans RepID=B6JK36_OLICO
putative nuclease
Putative nuclease {ECO:0000313|EMBL:AEI08322.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_750_bf_scaffold_1723_17
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14039..14560
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BR79_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08323.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_750_bf_scaffold_1723_18
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14682..15236
|
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BR80_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08324.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_750_bf_scaffold_1723_19
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15374..15934
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK33_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08325.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_750_bf_scaffold_1723_20
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15959..16663
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK32_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig134, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53756.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_1723_21
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16834..17313
|
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-H05 RepID=UPI00037DCD87
UspA domain protein {ECO:0000313|EMBL:CDM62358.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
UspA domain-containing protein
|
|
SCNpilot_cont_750_bf_scaffold_1723_22
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17586..17831)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZX5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR79416.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_1723_23
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17863..18483)
|
Autoinducer synthase n=2 Tax=Oligotropha carboxidovorans RepID=B6JK74_OLICO
autoinducer synthase
Autoinducer synthase {ECO:0000313|EMBL:AEI08328.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_cont_750_bf_scaffold_1723_24
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19891..20400
|
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GXB8_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig148, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53228.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
|
|
SCNpilot_cont_750_bf_scaffold_1723_25
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20537..21019
|
dnaB; replicative DNA helicase DnaB (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKZ1_AFIFE
Bradyrhizobium elkanii strain UASWS1015 Contig148, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53228.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
|
|
SCNpilot_cont_750_bf_scaffold_1723_26
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21010..21390
|
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GXB8_9BRAD
Replicative DNA helicase {ECO:0000313|EMBL:ERF82157.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
|
|
SCNpilot_cont_750_bf_scaffold_1723_27
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21742..21927
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK71_OLICO
Helicase {ECO:0000313|EMBL:KIZ46713.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_1723_28
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21974..22288)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH06_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26805.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
integrase/recombinase
|
|
SCNpilot_cont_750_bf_scaffold_1723_29
unknown
|
Not on your lists |
comp(22254..22418)
|
This feature has no annotations |