ggKbase home page

SCNpilot_cont_750_bf_scaffold_1727

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1727_1
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

264..4802
DNA (4539bp) protein (1513aa)
ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13]
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI000382B09D
ATP-dependent helicase {ECO:0000313|EMBL:EYT53222.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
SCNpilot_cont_750_bf_scaffold_1727_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4848..5036)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X759_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV76928.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1727_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5071..5634)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X773_NAKMY
hypothetical protein; K09957 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV76942.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1727_4
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5775..6839
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003770AF0 rbh
Copper resistance protein CopD {ECO:0000313|EMBL:ETK32296.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
Copper resistance D domain protein rbh
SCNpilot_cont_750_bf_scaffold_1727_5
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(6888..8144)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. RS9917 RepID=A3Z7Y9_9SYNE
Uncharacterized protein {ECO:0000313|EMBL:KJF17366.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
hypothetical protein; K07133
SCNpilot_cont_750_bf_scaffold_1727_6
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8415..9695)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626DFD rbh
Uncharacterized protein {ECO:0000313|EMBL:AIJ26931.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_1727_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9707..10183)
DNA (477bp) protein (159aa)
AsnC family transcriptional regulator n=1 Tax=Actinomadura atramentaria RepID=UPI00037BA0B8
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACV76945.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1727_8
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10346..11587
DNA (1242bp) protein (414aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27); K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] rbh
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:ADU47830.1}; EC=1.13.11.27 {ECO:0000313|EMBL:ADU47830.1};; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S679_INTC7 rbh
SCNpilot_cont_750_bf_scaffold_1727_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11603..12871)
DNA (1269bp) protein (423aa)
fumarylacetoacetase (EC:3.7.1.2); K01555 fumarylacetoacetase [EC:3.7.1.2] rbh
Fumarylacetoacetase {ECO:0000313|EMBL:ACV76947.1}; EC=3.7.1.2 {ECO:0000313|EMBL:ACV76947.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Fumarylacetoacetase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X778_NAKMY rbh
SCNpilot_cont_750_bf_scaffold_1727_10
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12868..13854)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S683_INTC7
Uncharacterized protein {ECO:0000313|EMBL:KGN33090.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1727_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14025..15266
DNA (1242bp) protein (414aa)
homogentisate 12-dioxygenase; K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5] rbh
Homogentisate 12-dioxygenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X779_NAKMY rbh
Homogentisate 12-dioxygenase {ECO:0000313|EMBL:ACV76948.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1727_12
unknown

Not on your lists

comp(15279..15377)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1727_13
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15374..16369)
DNA (996bp) protein (332aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:AHH93588.1}; EC=1.3.1.12 {ECO:0000313|EMBL:AHH93588.1};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
tyrA; prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12]
Prephenate dehydrogenase n=2 Tax=Saccharopolyspora erythraea RepID=A4F6A9_SACEN
SCNpilot_cont_750_bf_scaffold_1727_14
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16591..17073
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X781_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV76950.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_1727_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17102..17719
DNA (618bp) protein (206aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
CMP/dCMP deaminase zinc-binding n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X782_NAKMY
zinc-binding CMP/dCMP deaminase
SCNpilot_cont_750_bf_scaffold_1727_16
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18234..18521)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00036F953F
Leucobacter komagatae strain VKM ST2845 L_komagatae_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP52185.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1727_17
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18689..19684)
DNA (996bp) protein (332aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase n=1 Tax=Haloferax sp. BAB2207 RepID=L5NM93_9EURY
2-nitropropane dioxygenase {ECO:0000313|EMBL:ELK51786.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. BAB2207.;"
Displaying 17 items

View Taxonomy