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SCNpilot_cont_750_bf_scaffold_1840

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1840_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..298)
DNA (297bp) protein (99aa)
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000255|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00049}; Short=LeuRS {ECO:0000255|HAMAP-Rule:MF_00049};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Leucine--tRNA ligase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=SYL_RHOPB
SCNpilot_cont_750_bf_scaffold_1840_2
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(419..2119)
DNA (1701bp) protein (567aa)
diguanylate cyclase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037FD2E4
Diguanylate cyclase {ECO:0000313|EMBL:KJC41920.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1840_3
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2229..2930
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E8H7_BRASB
hypothetical protein; K06997
Uncharacterized protein {ECO:0000313|EMBL:ABQ32471.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_750_bf_scaffold_1840_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3018..3869)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003200369
Putrescine transport system permease {ECO:0000313|EMBL:ERF79792.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1840_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3904..4605)
DNA (702bp) protein (234aa)
Nuclease (SNase domain protein) n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07T80_RHOP5
Nuclease {ECO:0000313|EMBL:KJC38977.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
nuclease
SCNpilot_cont_750_bf_scaffold_1840_6
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4730..6586)
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DF23_BRAJP rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE08205.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
SCNpilot_cont_750_bf_scaffold_1840_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6688..6930
DNA (243bp) protein (81aa)
signal peptide protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000348C5FE
Uncharacterized protein {ECO:0000313|EMBL:ETR78496.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1840_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7015..7257
DNA (243bp) protein (81aa)
signal peptide protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000348C5FE
Uncharacterized protein {ECO:0000313|EMBL:ETR78496.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1840_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7476..8291
DNA (816bp) protein (272aa)
Peptidase C14, caspase catalytic subunit p20 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHG3_NITHX
peptidase C14, caspase catalytic subunit p20
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:ABE64334.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1840_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8338..9246)
DNA (909bp) protein (303aa)
Secretion protein HlyD n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20XC9_RHOPB
RND transporter {ECO:0000313|EMBL:KIZ40464.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
secretion protein HlyD
SCNpilot_cont_750_bf_scaffold_1840_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9401..9649)
DNA (249bp) protein (83aa)
adenylate/guanylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1]
Putative Adenylate/Guanylate cyclase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E9J5_BRASB
Adenylate cyclase {ECO:0000313|EMBL:KIZ40460.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
Displaying 11 items

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